Pairwise Alignments

Query, 266 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

Subject, 303 a.a., glycine cleavage system transcriptional activator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  130 bits (326), Expect = 4e-35
 Identities = 84/256 (32%), Positives = 136/256 (53%), Gaps = 4/256 (1%)

Query: 1   VSHQLKHLEQLWGLQLFHRGN-SQHLTSAGAALAPIVREFFMKLEATLADLREQNGRQRL 59
           VSHQ+K LE   GL+LF R N S  LT  G +    +++ F++L      L  ++    L
Sbjct: 37  VSHQIKALEDFLGLKLFRRKNRSLLLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSL 96

Query: 60  SVSTTYSFALKWLLPRLPDLAKAHPEILLTLDSTDSPINFSTTDPDVAIRLGNGHFPSLF 119
           +VS + SFA++WL+PRL   ++ +PEI + + + D+  +  T D DVAI  G G++P L 
Sbjct: 97  TVSMSPSFAIQWLVPRLSKFSEKNPEIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLR 156

Query: 120 SEFLFREQIFPVASPTLLARFGTPQTAAELLRYPLLTRDGAALVPKWEQWFAQVGVEVTS 179
           ++ L  E + PV SP LL     P +  E L++  L  D +     W+ WF Q G+   +
Sbjct: 157 ADKLRNEVLIPVCSPMLL-NGPKPLSKPEDLKHHTLLHDMSR--HDWQAWFRQCGITDIN 213

Query: 180 LKESIRYADTNMTIEAALLGQGIALARSGHVEAELNDGRLERLFELPCASPLAYYFVCPK 239
           + +   ++ +++ ++AA  GQG+AL  S     ++  GRL   F+    S  AYY VC +
Sbjct: 214 VNQGPIFSHSSLVLQAAAHGQGVALGYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQ 273

Query: 240 GIETQPHITHFRRWLV 255
                  +  FR W++
Sbjct: 274 NHAELGKVVAFREWML 289