Pairwise Alignments

Query, 170 a.a., Positive regulator of CheA protein activity (CheW) from Pseudomonas fluorescens FW300-N2E2

Subject, 164 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 2e-26
 Identities = 55/149 (36%), Positives = 89/149 (59%), Gaps = 4/149 (2%)

Query: 18  DSEFLQFLTFVSAREVYAIDTLCVREIIEYGQVTSVPMMPDFIRGVINLRGSVVPVIDLQ 77
           D   LQ++TF    E Y I+ + V+E++ Y ++  VP  P ++ G+INLRG+VV VID +
Sbjct: 15  DDAVLQWVTFKLDNETYGINVMQVQEVLRYTEIAPVPGAPHYVLGIINLRGNVVTVIDTR 74

Query: 78  ARFSKGATQQGNRTCIVILELVQEDEPQVLGIVVDSVSEVIEIELADIKAAPAIGNRIRE 137
           +RF   + +  + T IVI+E     E QV+GI+VDSV+EV+ +  ++I  AP +G     
Sbjct: 75  SRFGLQSAEVDDSTRIVIIEA----EKQVIGILVDSVAEVVYLRRSEIDNAPNVGTEESA 130

Query: 138 DFIRGMVKVRGAFLTVLQIDQVLCVSEIA 166
            FI+G+       L ++ +D++L   E A
Sbjct: 131 KFIQGVSNRDNELLILVDLDKLLSDEEWA 159