Pairwise Alignments

Query, 170 a.a., Positive regulator of CheA protein activity (CheW) from Pseudomonas fluorescens FW300-N2E2

Subject, 170 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.0 bits (232), Expect = 1e-24
 Identities = 47/144 (32%), Positives = 84/144 (58%), Gaps = 4/144 (2%)

Query: 22  LQFLTFVSAREVYAIDTLCVREIIEYGQVTSVPMMPDFIRGVINLRGSVVPVIDLQARFS 81
           ++FL+FV   E YA+D + V+EI  Y  VT +   P FI+GV+NLRG +VP++DL+ +F+
Sbjct: 19  VEFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANAPSFIKGVLNLRGDIVPIVDLRMKFN 78

Query: 82  KGATQQGNRTCIVILELVQEDEPQVLGIVVDSVSEVIEIELADIKAAPAIGNRIREDFIR 141
            G       T +++L +      +++GIVVD+VS+VI++    I  AP  G      +++
Sbjct: 79  VGTVTYDEFTIVIMLNVCD----RIVGIVVDAVSDVIKLSSEAILPAPEFGAAFDSRYLK 134

Query: 142 GMVKVRGAFLTVLQIDQVLCVSEI 165
           G+  V    + ++ I  ++   ++
Sbjct: 135 GLATVDEKMVILVNIQALISSDDL 158