Pairwise Alignments

Query, 170 a.a., Positive regulator of CheA protein activity (CheW) from Pseudomonas fluorescens FW300-N2E2

Subject, 158 a.a., chemotaxis protein CheW (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  107 bits (268), Expect = 7e-29
 Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 4/154 (2%)

Query: 12  AQQNPCDSEFLQFLTFVSAREVYAIDTLCVREIIEYGQVTSVPMMPDFIRGVINLRGSVV 71
           A Q   D E LQ +TF    E + +D L V+EII   ++T VP  P+F+ GVINLRG V+
Sbjct: 3   ATQKRQDDELLQLVTFSIGEEEFGVDILKVQEIIRTMEITKVPRAPEFVEGVINLRGKVI 62

Query: 72  PVIDLQARFSKGATQQGNRTCIVILELVQEDEPQVLGIVVDSVSEVIEIELADIKAAPAI 131
           P+IDL+ RF   +      T I+++E+       ++G VVDSVSEV+ I  + ++  P +
Sbjct: 63  PIIDLRRRFGLDSKTHDKHTRIIVIEI----NNMIVGFVVDSVSEVLRIPASTVEPPPPV 118

Query: 132 GNRIREDFIRGMVKVRGAFLTVLQIDQVLCVSEI 165
              +  ++I G+ K++   L +L +D++L   +I
Sbjct: 119 VAGLESEYISGVGKLQDRLLILLDLDRLLSNDDI 152