Pairwise Alignments

Query, 174 a.a., Positive regulator of CheA protein activity (CheW) from Pseudomonas fluorescens FW300-N2E2

Subject, 170 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.8 bits (242), Expect = 8e-26
 Identities = 53/161 (32%), Positives = 96/161 (59%), Gaps = 7/161 (4%)

Query: 1   MSISASRLPAPGTAAP---QYLTFSVGQEMFAVGTLCVREIVEYGPITPLPMAPAKVRGI 57
           M   AS  P P  +A    ++L+F +G+E +A+  + V+EI  Y P+T +  AP+ ++G+
Sbjct: 1   MDSRASLAPKPEFSAHDEVEFLSFVLGEEHYALDIMSVKEIRGYEPVTKIANAPSFIKGV 60

Query: 58  TNLRGAAIPVLDLGLCFGGVQTLENPRTCIVMLEVHGSGGAGLVGIIVDAVSEVLEIPAE 117
            NLRG  +P++DL + F       +  T ++ML V       +VGI+VDAVS+V+++ +E
Sbjct: 61  LNLRGDIVPIVDLRMKFNVGTVTYDEFTIVIMLNVCDR----IVGIVVDAVSDVIKLSSE 116

Query: 118 QIEPAPALQGRLSPAFVVGIGKLSDRFVLLLDIEHMLSSED 158
            I PAP         ++ G+  + ++ V+L++I+ ++SS+D
Sbjct: 117 AILPAPEFGAAFDSRYLKGLATVDEKMVILVNIQALISSDD 157