Pairwise Alignments

Query, 227 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 312 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  121 bits (304), Expect = 1e-32
 Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 2/215 (0%)

Query: 10  GQLRVQVLQGFAIGHLGALLAKFTKQYPDIDFDVVVNDRVIGPIEEGFDVAFQLFPATTE 69
           G L+V + Q F   H+   L  F  ++P+++  V + D  +  + EG D+   +      
Sbjct: 93  GVLKVGISQSFGAMHIIPALPSFMAKHPELELQVSLLDHKVDVVSEGLDLLLTMSEQLPL 152

Query: 70  RVVVRKLFTVHRLFCAAPEYLEQHCAPEHPLQLHDHRIALY-GGYSSRNRWQFNQGRDSL 128
            +V R L     L  A+P+Y+ +H  P  P QL DH   +Y G +   + WQF +G D  
Sbjct: 153 GMVARPLMKCQFLLVASPDYIAKHGEPSRPEQLVDHNCLVYQGEWHEHSMWQFKKGDDYC 212

Query: 129 DITLHAQMRSSSLHLIRDYARSGAGITCLPTLIVSDDVISGRLVPVLSQYRLP-TLDFVA 187
           +I +    R  +   ++  A SG G+  L + ++ D++  G LVP+L  ++L   L   A
Sbjct: 213 EIGVSGNFRVDNAPALKSAAISGLGVVYLASYLMEDEIAKGTLVPLLKDWQLTHHLPLQA 272

Query: 188 IYPQAQRQALKVGTLIDFLAEHIGPSPDWDQPLIE 222
           +YP+ +  A KV   I+F+ +HIG  P WD P  E
Sbjct: 273 VYPRRKHLAPKVSAFIEFIKDHIGNPPYWDIPYAE 307