Pairwise Alignments

Query, 227 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 2e-29
 Identities = 62/202 (30%), Positives = 96/202 (47%)

Query: 10  GQLRVQVLQGFAIGHLGALLAKFTKQYPDIDFDVVVNDRVIGPIEEGFDVAFQLFPATTE 69
           G LR+ V   F   ++  L+A+F K+YPDI   + ++D++   I  GFD+A ++      
Sbjct: 92  GNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMDDKITDLIAGGFDLAIRIGELPDS 151

Query: 70  RVVVRKLFTVHRLFCAAPEYLEQHCAPEHPLQLHDHRIALYGGYSSRNRWQFNQGRDSLD 129
            ++ RK+     + CA+P YL QH  P  P +L  H    Y  +     W F+       
Sbjct: 152 SLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHNCLFYSYFQDGVEWSFHSPDGMQR 211

Query: 130 ITLHAQMRSSSLHLIRDYARSGAGITCLPTLIVSDDVISGRLVPVLSQYRLPTLDFVAIY 189
           +      + ++   I      G GI  LP  IV  D+ +G L  +L+ Y LP     A+Y
Sbjct: 212 VQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEPDLQTGHLQALLTDYPLPEHGIYAVY 271

Query: 190 PQAQRQALKVGTLIDFLAEHIG 211
           PQ + Q  KV  LI+FL   +G
Sbjct: 272 PQRKYQPTKVTVLIEFLMAKLG 293