Pairwise Alignments

Query, 336 a.a., Transketolase, C-terminal section (EC 2.2.1.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 645 a.a., Deoxyxylulose-5-phosphate synthase (NCBI) from Rhodospirillum rubrum S1H

 Score =  120 bits (302), Expect = 7e-32
 Identities = 98/302 (32%), Positives = 139/302 (46%), Gaps = 9/302 (2%)

Query: 29  LLDLVADGHPIAVGTADLQYSNGLNRFAEKHPELFIQFGIAEQNMVSAAAGIATTGTMPF 88
           L+   A  H I   TA +    GL++ A  +P+     GIAEQ+ V+ AAG+A  G  PF
Sbjct: 332 LVAAAAKDHRIVGVTAAMPGGTGLDKLATAYPQRCFDVGIAEQHAVTFAAGLACEGLKPF 391

Query: 89  VATFASFLALLCCEQIRMDVAYSALPVRLIGHHTGISLGFYGTSHHATEDIAIMRSIADL 148
           VA ++SFL     +Q+  DV    LPVR      G  +G  G +H    D+A +  + +L
Sbjct: 392 VALYSSFLQ-RGYDQVVHDVVLQKLPVRFAIDRAGF-VGADGATHGGVFDMAFLGCLPNL 449

Query: 149 TVVAPADGPQLA-AAIRASIHHPQPIYFRIGRGQEPIVY--RDDVTFTFGKAIVHSVGHD 205
            V+  AD  +LA   + A+ H   PI  R  RG+   V    D      GK  +   G  
Sbjct: 450 VVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGVEIPEDPQPLAIGKGRIVREGKG 509

Query: 206 VTLIATGSMLHPTLEAAKALTDSGIAVGVIDMHTLKPIDREAILNAATGTNLLITVEEHN 265
           V L++ G+ L   LEA + L   G+   V D   LKP D E + + A    +LI VEE  
Sbjct: 510 VALLSIGTRLQSCLEACEILAARGLTPTVADARFLKPFDEELVADLAARHEVLIVVEE-G 568

Query: 266 VLGGLGGAVAEVLADEG---AGVRLVRHGIHDEYSLIAPPTHLYRHYRLDAAGIEAVTRE 322
            +GG G  VA  L ++G    G++L    I D +     P        +DA  I     +
Sbjct: 569 AIGGFGAHVATWLTNQGLLDGGLKLRALHIPDRFFEHDAPEVQCAKAGIDAQAITTAVLD 628

Query: 323 AL 324
           AL
Sbjct: 629 AL 630