Pairwise Alignments

Query, 336 a.a., Transketolase, C-terminal section (EC 2.2.1.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 622 a.a., 1-deoxy-D-xylulose-5-phosphate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  115 bits (288), Expect = 3e-30
 Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 12/300 (4%)

Query: 29  LLDLVADGHPIAVGTADLQYSNGLNRFAEKHPELFIQFGIAEQNMVSAAAGIATTGTMPF 88
           L D+      +   T  ++  +G+  F+++ P  +    IAEQ+ V+ AAG A  G  P 
Sbjct: 329 LCDMAQKDDKVLGITPAMREGSGMVEFSQRFPNQYFDAAIAEQHAVTLAAGFACEGYKPV 388

Query: 89  VATFASFLALLCCEQIRMDVAYSALPVRLIGHHTGISLGFYGTSHHATEDIAIMRSIADL 148
           +A +++FL     +Q+  DVA   LPV       GI +G  G +H    D++ MR+I ++
Sbjct: 389 LAIYSTFLQR-GYDQLIHDVALQKLPVIFAIDRGGI-VGPDGPTHQGAFDLSYMRAIPNM 446

Query: 149 TVVAPADGPQLAAAIRASI-HHPQPIYFRIGRGQ---EPIVYRDDVTFTFGKAIVHSVGH 204
            ++AP+D  +    +     ++  P   R  RG    EP V      +  GK ++   G 
Sbjct: 447 VIMAPSDENECRQMLYTGYCYNEGPTAIRYPRGSATGEPQV-ETMTAYEIGKGLIKREGK 505

Query: 205 DVTLIATGSMLHPTLEAAKALTDSGIAVGVIDMHTLKPIDREAILNAATGTNLLITVEEH 264
            + ++  G+ L    +AA+AL D+ +A    DM  +KP+D E +   AT  +LL+TVEE+
Sbjct: 506 KIAILNFGTTLASASQAAEAL-DATLA----DMRFVKPLDVELVKQLATSHDLLVTVEEN 560

Query: 265 NVLGGLGGAVAEVLADEGAGVRLVRHGIHDEYSLIAPPTHLYRHYRLDAAGIEAVTREAL 324
            ++GG G  V E+L      + ++  G+ DE+        +    +LD  GIEA  R  L
Sbjct: 561 AIMGGAGSGVLELLQQLKLPMPVLNIGLPDEFIKHGECGEILAELQLDGPGIEAQIRAYL 620