Pairwise Alignments

Query, 336 a.a., Transketolase, C-terminal section (EC 2.2.1.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 641 a.a., deoxyxylulose-5-phosphate synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  139 bits (351), Expect = 2e-37
 Identities = 97/280 (34%), Positives = 141/280 (50%), Gaps = 9/280 (3%)

Query: 23  DYLSEGLLDLVADGHPIAVGTADLQYSNGLNRFAEKHPELFIQFGIAEQNMVSAAAGIAT 82
           D   E L  L      I   TA +    G N F E+HP+ F+  GI EQ+ V+ AAG+A 
Sbjct: 328 DVFGETLCRLADMDERIVAITAAMPEGTGTNCFRERHPDRFVDVGICEQHAVTFAAGLAI 387

Query: 83  TGTMPFVATFASFLALLCCEQIRMDVAYSALPVRLIGHHTGISLGFYGTSHHATEDIAIM 142
            G  PFVA +++FL     +QI  DV    LPV L     G+ +G  G +HH   D++ +
Sbjct: 388 QGYRPFVAIYSTFLQ-RSYDQIVHDVCIQKLPVVLCLDRAGL-VGEDGPTHHGAFDLSFL 445

Query: 143 RSIADLTVVAPADGPQLAAAIRASIHHPQPIYFRIGRGQE---PIVYRDDVTFTFGKAIV 199
           R I  ++++AP D   L AA+  ++H   P+  R  RG     P+          G   V
Sbjct: 446 RHIPHMSIIAPRDEADLQAAMYTALHLDAPLAIRYPRGVGFGIPLA-ESPSPLPVGVGEV 504

Query: 200 HSVGHDVTLIATGSMLHPTLEAAKALT-DSGIAVGVIDMHTLKPIDREAILNAATGTNLL 258
              G  V +IA GS +HP+LEAA+ L  ++G    V D   +KP+    +L+     + L
Sbjct: 505 LKEGEGVAVIAVGSRVHPSLEAAERLAEETGRHATVFDARWVKPLPEAQLLDIVARHDAL 564

Query: 259 ITVEEHNVLGGLGGAVAEVLADEGA--GVRLVRHGIHDEY 296
           + VEE+ + GG   AV E+LAD  A  G  + R G+ DE+
Sbjct: 565 LFVEENALAGGFSSAVLELLADRNALSGKHIRRIGLPDEF 604