Pairwise Alignments

Query, 301 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 312 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 87.4 bits (215), Expect = 4e-22
 Identities = 75/282 (26%), Positives = 122/282 (43%), Gaps = 16/282 (5%)

Query: 7   LLALLVAFLWGAQVTAVKIGGAELPPILMVAMRYAIMALFLLPLLKR-------VKREQF 59
           L  LL AF WG    A +IG A   P  +  +R+ +    L+  ++R       V   + 
Sbjct: 28  LKLLLAAFFWGGTFVAGRIGAAHAGPFALAFLRFTLATAILVWHIRRREGALPQVSGSRN 87

Query: 60  ASVALIATITGTLHFGLLYCGIARVDASTSAIIYQLAAPFTLVLAFAL-LGEVLKLRLLA 118
               L+   TG   +  L+    +   +  A +     P  + L  AL LGE L  R   
Sbjct: 88  ILFVLLLGATGIFAYNALFFTALQTIPAGRAAVVVANNPIVIALGAALFLGEPLTRRKCI 147

Query: 119 GIVLAFAGVLVLLATPSA-----GGTFIGMLLVALAALAFAAGSVLTKR-LGPLDPLALS 172
           GI ++  G LV +          GG   G + +     ++AA S+L K+ +  L PLA  
Sbjct: 148 GIAISVCGALVAVTRGDPVSFLQGGVSWGDVALVGCLASWAAYSLLGKKAMSSLSPLAAV 207

Query: 173 AWTAVIAAPQLLLWSFVQEGEQWTRVYTASAQAWWAVLYTALSGGLLGFGLWFWLLGRNS 232
            W+    A  LL ++ + EG     + T +   W ++ Y  + G  LGF  ++  + R  
Sbjct: 208 TWSCASGACMLLPFA-LHEG-MLDAITTYTPDVWASIFYLGMFGTALGFTWFYEGVDRIG 265

Query: 233 MQQLSPYLLLVPVFAIVVSQVMLAEGFSQRLVIGAVLTLSGV 274
             +   ++  VP+ AI+   + L E  S  L++GA L L+GV
Sbjct: 266 AAKAGVFINFVPITAILSGWLFLGEPLSPSLILGAALVLTGV 307