Pairwise Alignments

Query, 158 a.a., Probable porin from Pseudomonas fluorescens FW300-N2E2

Subject, 416 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  127 bits (318), Expect = 3e-34
 Identities = 63/156 (40%), Positives = 94/156 (60%), Gaps = 4/156 (2%)

Query: 7   GSAYGGKIDNDMLSGLLSYAVVGHTLSAGYQTLSGEAGLPYVSGATVYSFSNVGIGKFIE 66
           G    G+IDN   +G++  +  GH +SAG+Q  SG++  P ++G   Y  + V +  F  
Sbjct: 261 GEERAGEIDNRNFNGIVGLSHGGHRVSAGWQIQSGDSRFPSLNGGAAYVVNLVTLHDFTH 320

Query: 67  EDEKTWMLGYGYDFARLGVPGLTFSTRYLSGNDGKSN--TTVKEWERDAEIAYVVQQGTF 124
            D+ +W L Y Y+FA LG+PGL+F TRY+ G + ++N   + +EWERD++I YVVQ G  
Sbjct: 321 ADQDSWQLRYDYNFAALGLPGLSFMTRYVDGRNARTNFSRSGEEWERDSDITYVVQSGAL 380

Query: 125 KGLGVKLRNYVYRS--DFSRGRDSNRIYFSYDIALW 158
           KGL V+ RN  +RS        D NR+  +Y +ALW
Sbjct: 381 KGLSVQWRNLSFRSGNGLKTAIDENRVILNYTLALW 416