Pairwise Alignments

Query, 158 a.a., Probable porin from Pseudomonas fluorescens FW300-N2E2

Subject, 420 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  133 bits (335), Expect = 3e-36
 Identities = 64/151 (42%), Positives = 89/151 (58%), Gaps = 3/151 (1%)

Query: 11  GGKIDNDMLSGLLSYAVVGHTLSAGYQTLSGEAGLPYVSGATVYSFSNVGIGKFIEEDEK 70
           G  +D D    + +Y + GH   AGYQ L+G+ G  Y++G+     + V I  F  EDE+
Sbjct: 270 GSNVDADAFGAMFTYKLGGHAFGAGYQQLNGDTGFAYIAGSDNSLVNLVQINDFGNEDER 329

Query: 71  TWMLGYGYDFARLGVPGLTFSTRYLSGND---GKSNTTVKEWERDAEIAYVVQQGTFKGL 127
           +W + Y YDFA +G+PGL+  TRYLSG++   G   +  K WER+ +IAYV Q G  K L
Sbjct: 330 SWQVRYDYDFAAMGIPGLSLMTRYLSGDNVDRGAGASEGKTWERNTDIAYVFQSGPLKNL 389

Query: 128 GVKLRNYVYRSDFSRGRDSNRIYFSYDIALW 158
           G++LRN   RS+F    D NR   SY + LW
Sbjct: 390 GLRLRNATTRSNFGSDLDENRFIVSYSLPLW 420