Pairwise Alignments

Query, 360 a.a., Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., 3-oxoacyl-(acyl carrier protein) synthase III (RefSeq) from Shewanella loihica PV-4

 Score = 56.6 bits (135), Expect = 9e-13
 Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 5/165 (3%)

Query: 6   IVSYGAGIPVCRLKVDDVIQVWKNTDLSLVKGQLGVLERAVLQPDEDVITLGVLAAQRAL 65
           I+  G+ +P       D+ ++   +D  +V+ + G+ ER +   DE V T+G  AA RAL
Sbjct: 5   ILGTGSYLPAQVRSNQDLEKMVDTSDQWIVE-RTGISERRIAAEDESVSTMGYAAAVRAL 63

Query: 66  DKA--PPCPLEALYLGTCTNPYDSRASAAIILEMLGCGYDAFCADVQFAGKSGTSALQIA 123
           + A   P  L+ +  GT +      A+A  I  MLG  +     DV  A      AL +A
Sbjct: 64  EMAGVDPSELDMIVCGTTSANNAFPAAACEIQAMLGV-HTIPAFDVAAACSGFVYALSVA 122

Query: 124 YALVASGMVGNALAVGADTINRNTAPGDLTESYA-GAGAAALLLG 167
              V +G     L +GAD ++R   P D T     G GA A ++G
Sbjct: 123 DQFVKTGAAKKVLVIGADVLSRLCEPEDRTTIILFGDGAGAAVVG 167