Pairwise Alignments

Query, 360 a.a., Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 5/168 (2%)

Query: 6   IVSYGAGIPVCRLKVDDVIQVWKNTDLSLVKGQLGVLERAVLQPDEDVITLGVLAAQRAL 65
           I+  G+ +PV      D+ ++ + +D  +V+ + G+ ER +   DE V T+G LAA  AL
Sbjct: 5   ILGTGSYVPVQVRSNQDLEKMVETSDQWIVE-RTGISERRIAAQDETVSTMGYLAALNAL 63

Query: 66  DKA--PPCPLEALYLGTCTNPYDSRASAAIILEMLGCGYDAFCADVQFAGKSGTSALQIA 123
           + A      L+ +  GT +      A+A  I  MLG  +     D+  A      AL +A
Sbjct: 64  EMAGIEASDLDMIICGTTSAANAFPAAACEIQAMLGV-HTIPAFDIAAACSGFVYALSVA 122

Query: 124 YALVASGMVGNALAVGADTINRNTAPGDLTESYA-GAGAAALLLGTEN 170
              V +G     L +GAD ++R   P D T     G GA A ++G  +
Sbjct: 123 DQFVKNGTAKKVLVIGADVLSRLCEPEDRTTIILFGDGAGAAIIGASD 170