Pairwise Alignments

Query, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  384 bits (985), Expect = e-110
 Identities = 200/436 (45%), Positives = 283/436 (64%), Gaps = 1/436 (0%)

Query: 351  ENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVNDTLGHDA 410
            E++  LA +D LT LPNR+LF   L  ++ +A R    +A+LFLDLDRFK +ND++GH  
Sbjct: 1060 EDLRLLASYDPLTNLPNRTLFQDRLDHALAQAHRTGNMVALLFLDLDRFKHINDSMGHHI 1119

Query: 411  GDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVLGAIARPFNL 470
            GD LLK VA RL+ C+R  DTVARLGGDEF I+L  ++  K     A+K++ A   PF L
Sbjct: 1120 GDLLLKAVAHRLQNCVREGDTVARLGGDEFTIILEGVAKTKAATVIAEKLIRAFQTPFIL 1179

Query: 471  QGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYSAKLNADSLERM 530
            + Q   ++ S+GIS++P D  D  +L K AD AMY AK  G+NNFQFY+ +LN  ++  +
Sbjct: 1180 EDQALNISPSIGISLYPMDASDSTSLVKYADTAMYHAKSLGRNNFQFYTLRLNEYAMRHV 1239

Query: 531  TLELSLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWNHPDLGIVAPMQFIPVAEETG 590
             LE  ++ A+ R E  L +Q K  +  G ITG EALLRWN  +LG ++P +FIP+AEE G
Sbjct: 1240 QLEAGIKQAIVRQELSLVFQPKFRVSDGSITGFEALLRWNSKELGPISPAEFIPLAEEIG 1299

Query: 591  LIVPIGKWVLKTACQQNVAWQQQGLPCLGVAVNLTARQFADENLLTDLAGILAETGMDAR 650
            +I  +G WV+  AC+    +   G   L VAVNL+ARQ    ++L+ +   LA  G+ A+
Sbjct: 1300 IINQLGHWVVNEACRHMAQFAAAGFDDLHVAVNLSARQL-KADILSTIEVALAVAGLPAK 1358

Query: 651  LLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSALEQFPLDVIKIDRS 710
             LELE+ ES++M+  ++++ VL  LK L V +A+DDFG GYSSL+ L++FPLD +KIDR 
Sbjct: 1359 CLELELTESMIMKSPQESVAVLQRLKALGVSLAVDDFGTGYSSLAYLKRFPLDTLKIDRE 1418

Query: 711  CICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNACDEFQGFYFNKPV 770
             + D S+  +D A+T AIIA+  +L L VVA+GVE + Q + LR + CD+ QGF   KP+
Sbjct: 1419 FVRDISTDPDDAAITGAIIALAHSLELNVVAEGVENEAQLEHLRKHGCDQVQGFLLGKPM 1478

Query: 771  PADQFKVLLKAQAAGT 786
             A     LLK++   T
Sbjct: 1479 AARDAMALLKSRTLNT 1494