Pairwise Alignments

Query, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  388 bits (996), Expect = e-112
 Identities = 213/503 (42%), Positives = 305/503 (60%), Gaps = 21/503 (4%)

Query: 293 GLSEEEQLATVTRQA-HTYLWRTAGGSLLLVLLAGLLARMSWQLVQSRLRAGEAKIAYA- 350
           GL E + LATV  +     LWR   G +      G        +   R RAGE     A 
Sbjct: 339 GLHENDFLATVAAEVDRAGLWR---GEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAA 395

Query: 351 -----------ENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRF 399
                      E++ + A  D LT LPNR L    L Q++ +A R  RQ+ V+FLDLDRF
Sbjct: 396 ITDITKRKRDEEHIRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRF 455

Query: 400 KQVNDTLGHDAGDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQK 459
           KQ+ND+ GH AGD++LK  A RL+ C+R SD+V RLGGDEF+++L  + D    A  A+K
Sbjct: 456 KQINDSYGHSAGDEVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEK 515

Query: 460 VLGAIARPFNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYS 519
           +L +++ PF + G E     SVGI+ FP  G     L +NAD+AMY AKQ G+  +  ++
Sbjct: 516 ILYSLSEPFPIGGTEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFT 575

Query: 520 AKLNADSLERMTLELSLRHALERHEFQLHYQAK--RDIGSGRITGMEALLRWNHPDLGIV 577
             +   SL  +T+E  LRHAL R EF+LH+Q K   D+    + G EAL+RW HP+ G++
Sbjct: 576 PDMARRSLALLTMESDLRHALARDEFELHFQPKVRADL---TLIGAEALIRWRHPEKGLI 632

Query: 578 APMQFIPVAEETGLIVPIGKWVLKTACQQNVAWQQQGLPCLGVAVNLTARQFADENLLTD 637
            P  FIP+AEE+GLI+PIG+W L+ AC + ++W+ +GL    V+VN++ RQF D+ L+  
Sbjct: 633 NPGDFIPLAEESGLILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVET 692

Query: 638 LAGILAETGMDARLLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSAL 697
           +  IL ETG++   L+LEI E+++  DV+ A+  L  LK L V ++IDDFG GYSSL+ L
Sbjct: 693 VRQILVETGLEPEALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYL 752

Query: 698 EQFPLDVIKIDRSCICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNA 757
           + FP+D +KID++ + D     +D A+   IIA+ R L  +VVA+GVE  EQA+FL    
Sbjct: 753 KTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRD 812

Query: 758 CDEFQGFYFNKPVPADQFKVLLK 780
           C  FQGF +++P+P  +F   L+
Sbjct: 813 CQNFQGFLYSRPLPPAEFTTFLR 835