Pairwise Alignments

Query, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 986 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  430 bits (1105), Expect = e-124
 Identities = 242/545 (44%), Positives = 332/545 (60%), Gaps = 21/545 (3%)

Query: 235 FRARRSGEAISAGNEVDYAAVVPDTENTDAVRLINGTDGVRRYTSARQLYDFPLAVIVGL 294
           F A  S +  SAG   +Y  V   +    A    +   G+R             AVI GL
Sbjct: 185 FAAENSHDPSSAGVGCNYIRVCERSWGESAEEAQDIAVGIR-------------AVIDGL 231

Query: 295 SEEEQLATVTRQAHTYLWRTAGGSLLLVLLAGLLARMSWQLVQSRLRAGEAKIAYAENVE 354
             E  L           W         VL+  L AR +   V   L   E  +   + + 
Sbjct: 232 QHEFSLVYACHSPTEKRW-------FRVLVTPLEARGNRGAVVMHLNVTET-VEAQQRLT 283

Query: 355 YLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVNDTLGHDAGDQL 414
           +LA+ D LT LPNR LF + L  ++    R   +LAV+F+DLDRFK VNDTLGH AGD L
Sbjct: 284 HLAHFDSLTGLPNRLLFRERLKAALAMVQRQGGRLAVMFIDLDRFKVVNDTLGHLAGDAL 343

Query: 415 LKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVLGAIARPFNLQGQE 474
           L++VA R+  CLR SDTV RLGGDEF +L+P+   + DV   A++++  +A+P  L+GQE
Sbjct: 344 LQQVAARIGGCLRASDTVGRLGGDEFAVLVPDPEREYDVTVVARRLVDTLAQPITLEGQE 403

Query: 475 FRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYSAKLNADSLERMTLEL 534
             V+AS+GI+++P D  D + L +NAD AMY+AK+ G+NNFQF++A +NA   E++ LE 
Sbjct: 404 LFVSASIGITLYPDDCDDLEKLIRNADTAMYRAKELGRNNFQFFTAAMNARVKEQLQLET 463

Query: 535 SLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWNHPDLGIVAPMQFIPVAEETGLIVP 594
            LR A++R EF LH+Q K     G ITG EALLRW HP  G+V+PM+FIP+ EETGLIVP
Sbjct: 464 DLRRAVQRQEFILHFQPKVSCSHGGITGFEALLRWQHPVRGLVSPMEFIPLLEETGLIVP 523

Query: 595 IGKWVLKTACQQNVAWQQQGLPCLGVAVNLTARQFADENLLTDLAGILAETGMDARLLEL 654
           +G WVL+ ACQQ  AW   G   L VAVNL+ARQ   E L+ D+   L ++G+  + LEL
Sbjct: 524 VGTWVLQQACQQAAAWHLAGHGQLTVAVNLSARQLQSEALVQDVRQALEDSGLPPQALEL 583

Query: 655 EIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSALEQFPLDVIKIDRSCICD 714
           E+ ESLLM  V+  + +L  LK + V++++DDFG GYSSL+ L++ PLD +K+DR+ + D
Sbjct: 584 ELTESLLMSHVEDNIALLNRLKAMGVQLSVDDFGTGYSSLAYLKRLPLDTVKVDRAFVQD 643

Query: 715 TSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNACDEFQGFYFNKPVPADQ 774
            ++   D ++T A+I M   L L VVA+GVET+ Q   L  N CDE QG+YF++PVPA +
Sbjct: 644 ITADPGDASITRAVITMAHNLRLKVVAEGVETEGQIALLVANHCDEMQGYYFSRPVPAPE 703

Query: 775 FKVLL 779
              LL
Sbjct: 704 ALALL 708