Pairwise Alignments

Query, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 974 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  404 bits (1037), Expect = e-116
 Identities = 209/438 (47%), Positives = 296/438 (67%), Gaps = 4/438 (0%)

Query: 348 AYAENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVNDTLG 407
           A  + +++LA HD LT LPNR L    L+ +I  A+R   ++ VLF+DLDRFK +ND+LG
Sbjct: 522 AAQDRIQFLAQHDPLTGLPNRMLLQDRLTVAIAAAAREGHEVGVLFIDLDRFKTINDSLG 581

Query: 408 HDAGDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVLGAIARP 467
           H  GD+L+K V  RL+  +R SDTV+RLGGDEF+++L  +   +D A  A  VL  +  P
Sbjct: 582 HSVGDELIKGVTKRLQDAVRESDTVSRLGGDEFIVVLHRIRRSEDAAHVADAVLAQLTAP 641

Query: 468 FNLQGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYSAKLNADSL 527
           FN+ G+E RVTAS+GISVFP DG DE+ L KNAD AM+ AK+ G+NN+QF+  ++NA + 
Sbjct: 642 FNIAGKELRVTASIGISVFPADGEDEEGLIKNADTAMFHAKERGRNNYQFFRPEMNARAG 701

Query: 528 ERMTLELSLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWNHPDLGIVAPMQFIPVAE 587
           ER+ LE SLR A++R EF L YQ + +I SGR+ G EAL+RW   D G V+P  FIP+AE
Sbjct: 702 ERLALENSLRGAVQRKEFVLFYQPQVEIRSGRLVGAEALIRWRRGDSGFVSPADFIPLAE 761

Query: 588 ETGLIVPIGKWVLKTACQQNVAWQQQ----GLPCLGVAVNLTARQFADENLLTDLAGILA 643
           ETG I+ IG WVL  AC+Q V W QQ    GL  + VAVNL++ QF  ++   +L  I+ 
Sbjct: 762 ETGTILEIGDWVLAEACRQQVQWDQQWPAMGLKPVPVAVNLSSLQFRQKHFKENLLDIVG 821

Query: 644 ETGMDARLLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSALEQFPLD 703
           +  + A  +ELE+ ES++M++ ++   VL  LK   +R++IDDFG GYSSLS L++FPLD
Sbjct: 822 DYPLPAGRIELELTESIVMEEPEQVGAVLAELKQAGLRLSIDDFGTGYSSLSYLKRFPLD 881

Query: 704 VIKIDRSCICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNACDEFQG 763
            +KID S + D  + S D A+  A++++G +L L VVA+GVE + +   L    CD  QG
Sbjct: 882 KLKIDASFVRDIVNDSADLAIVHAVVSLGHSLGLKVVAEGVEHEAELLILNAMGCDIAQG 941

Query: 764 FYFNKPVPADQFKVLLKA 781
           ++F +PVPA++F+  + A
Sbjct: 942 YHFCRPVPAEEFQAWVAA 959