Pairwise Alignments

Query, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  392 bits (1007), Expect = e-113
 Identities = 202/430 (46%), Positives = 290/430 (67%), Gaps = 1/430 (0%)

Query: 351  ENVEYLAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVNDTLGHDA 410
            E++ +LA  D LT LPNR+LF   L+ +I +A R +  +A+LFLDLDRFK +ND++GH  
Sbjct: 1073 EDLRFLASFDTLTGLPNRTLFQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHHI 1132

Query: 411  GDQLLKEVALRLKACLRTSDTVARLGGDEFVILLPELSDDKDVATAAQKVLGAIARPFNL 470
            GD LLK VA RL+  +R  DTVARLGGDEF I+L  ++  K     ++KVL A   PF L
Sbjct: 1133 GDLLLKAVAHRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLKAFQAPFLL 1192

Query: 471  QGQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFYSAKLNADSLERM 530
              +   ++ S+GIS++P D  D  +L K AD AMY AK  G+NNFQFY+ KLN  +   +
Sbjct: 1193 DDKSLTISTSIGISLYPNDAEDVDSLIKFADTAMYHAKALGRNNFQFYTNKLNEMATRHV 1252

Query: 531  TLELSLRHALERHEFQLHYQAKRDIGSGRITGMEALLRWNHPDLGIVAPMQFIPVAEETG 590
             LE  L+ A+ R+E  L YQ K  +  G +TG+EALLRW+H +LG ++P +FIP+AEETG
Sbjct: 1253 QLEAGLKQAISRNELSLVYQPKFCLRKGSLTGLEALLRWHHSELGPISPAEFIPLAEETG 1312

Query: 591  LIVPIGKWVLKTACQQNVAWQQQGLPCLGVAVNLTARQFADENLLTDLAGILAETGMDAR 650
            +I  IG WV+  ACQQ   W + G   + +AVNL+ARQ    ++++ +   L+ +G+ A+
Sbjct: 1313 IINQIGHWVINHACQQLAEWNELGFGDISMAVNLSARQL-KADIISTIEVALSVSGLPAK 1371

Query: 651  LLELEIAESLLMQDVKKALNVLTGLKHLKVRIAIDDFGIGYSSLSALEQFPLDVIKIDRS 710
             LELE+ ES++M + ++++N+L+ LK L + IA+DDFG GYSSLS L++FP+D +KIDR 
Sbjct: 1372 ALELELTESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDRE 1431

Query: 711  CICDTSSVSEDKALTEAIIAMGRTLSLTVVAQGVETKEQADFLRDNACDEFQGFYFNKPV 770
             + D ++  +D A+T AIIA+  +L L VVA+GVET+EQ +FL    CD+ QGF  +KP+
Sbjct: 1432 FVRDITNDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKPL 1491

Query: 771  PADQFKVLLK 780
             A     LL+
Sbjct: 1492 SAQDCLALLQ 1501