Pairwise Alignments

Query, 349 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 358 a.a., Fe(3+)-siderophore ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (473), Expect = 6e-52
 Identities = 115/324 (35%), Positives = 188/324 (58%), Gaps = 9/324 (2%)

Query: 28  LLLMVAVVALALYALTVGSYSLSVAQVWQALLAPEQVNSTMRNLLWELRLPRVLLAVLAG 87
           L+L + V+AL + A  VG   +S++ V  A+L  E  +   R +L ++RLPR+  A+ AG
Sbjct: 39  LVLSLIVLALMILATCVGKLPISISDV-TAILLGEVTSGFKRQVLLDIRLPRIFTALFAG 97

Query: 88  AAMSLAGLLMQSLTRNPLAAPGLVGVESGASVTMLLIIVLWPALLPLEFYPLAALAGGLA 147
           AA+ L+G + QS++RNPL +P ++G  SGA+   LL I+L+        +  +A+AGG+ 
Sbjct: 98  AALGLSGAIFQSISRNPLGSPDIIGFTSGAATGALLQIILFSGSGVAVVF--SAIAGGVM 155

Query: 148 VAFFVALLSWRQG-ISPLRLILVGVGLTAMLSAVADLLITYGNIDQVESALMWLGGSLHR 206
            A  V LLS + G +   RL+L G+G+ ++L+A+  LL+  G++D   +A +WL GSLH 
Sbjct: 156 TAIAVYLLSVKSGTVGRYRLVLTGIGVGSVLTALNGLLLVKGSLDSAITANLWLSGSLHA 215

Query: 207 ASWPQVHSLGLWLLVAGVPLLFCHRQLNLLQLGEKVALSRGLNVTWIMVSLLLCSVMLTA 266
             W  V  +   +LV    +    R L +L++G+++A   G+ V  I + ++L +V L A
Sbjct: 216 REWSHVFPVMCGVLVLLPLIKSLARSLQMLEMGDEIARQLGVVVEPIRLFMILAAVTLAA 275

Query: 267 AAVANVGTMTFVGLVAPHLARQMAGDRHGALIPL--SALVGALLVLAGDTLGRGLLPPLQ 324
            A    G + F+ L AP LA ++   R  A IPL  + L+GA L+L  D L + +   L 
Sbjct: 276 LATGAAGPIAFIALAAPQLAARL---RQTANIPLVSAGLMGACLLLGADLLTQWMPLALT 332

Query: 325 LPAGLVVAIIGAPYLIVLLARQRS 348
           LP G +  ++G  YL++LL R ++
Sbjct: 333 LPIGRITGLVGGMYLLILLMRSKN 356