Pairwise Alignments

Query, 244 a.a., ABC-type amino acid transport, signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

Subject, 286 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 4/180 (2%)

Query: 63  SLSLYPWARAYEKALHEPNVLIFPLDRTPAREQLFKWVGEIHRVASRLYKMRDSKGIAIN 122
           S   YP+ RA      E   LI  +   P REQ   +   +  V+ RLYK  DSK I   
Sbjct: 90  SHEFYPFIRAQTLIKRELADLIIGVWYRPEREQWIDFSDPLLSVSIRLYKRSDSK-IVFR 148

Query: 123 NLEDAKQYSIGVVRNDAKQIYLQQRGFTRLVISANNHDNFQKLLNHQIQLLPMPENTARL 182
           +++D K Y IG+ R  A  +   Q        S ++  N +KLL  ++ L+ + E+ AR 
Sbjct: 149 DIKDLKPYLIGIGRGYANPVAFGQANLNTEAAS-SDAVNLRKLLAGRVDLVLICEDVARY 207

Query: 183 MSKDAQVDFT-SLEEV-YTLDEQPHRVHLAFSLSTPDEVVARAQRAFEQLKASGEVARIM 240
           + +    ++   LE V   L  +   + +A  L    +++A   ++  +L  SGE+ +I+
Sbjct: 208 LIERPGSEYNGKLEPVGDPLSVELFHIGVAKHLPNARQILADFNQSLAELHRSGELTKIL 267