Pairwise Alignments

Query, 244 a.a., ABC-type amino acid transport, signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

Subject, 248 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 68.6 bits (166), Expect = 1e-16
 Identities = 55/220 (25%), Positives = 106/220 (48%), Gaps = 6/220 (2%)

Query: 22  AEAIEVVTED-SLYAYQRDDKVVGPGIRIAEETLKNAQFTDYSLSLYPWARAYEKALHEP 80
           A ++ ++TE+ +  +YQ     +G G+ + +   K     + ++ + PWARA+  A  + 
Sbjct: 12  AASLRMLTEEWAPMSYQEQGLPMGYGVSLVQRLAKELG-EEANIEVLPWARAFAIAEGQA 70

Query: 81  NVLIFPLDRTPAREQLFKWVGEIHRVASRLYKMRDSKGIAINNLEDAKQYSIGVVRNDAK 140
           NVL+F       R + F +VG I   +  +Y   D +    +  E     S+GV R    
Sbjct: 71  NVLLFATSLNEQRSRDFDFVGPIATTSISIYAKADDRVNPASVAELDALGSVGVYRGSLG 130

Query: 141 QIYLQQRGFTRLVISANNHDNFQKLLNHQIQLLPMPENTARLMSKDAQVDFTSLEEVY-T 199
           +  L ++G   L +++    + ++L + +I+     +     +  +  +    L+EV+  
Sbjct: 131 ESILTRQGVEHLTVASFPQQSARQLQHDRIRFWCQADLAVERLLAEVNM---GLDEVHPV 187

Query: 200 LDEQPHRVHLAFSLSTPDEVVARAQRAFEQLKASGEVARI 239
           L+     ++LAFS  T  E V+R   A  +L+ASGE+AR+
Sbjct: 188 LELAQIDLYLAFSKGTDPERVSRWHEALVKLQASGEMARL 227