Pairwise Alignments

Query, 244 a.a., ABC-type amino acid transport, signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

Subject, 251 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 76.3 bits (186), Expect = 6e-19
 Identities = 67/235 (28%), Positives = 109/235 (46%), Gaps = 7/235 (2%)

Query: 12  LLTSISLQSHAEAIEVVTED-SLYAYQRDDKVVGPGIRIAEETLKNAQFTDYSLSLYPWA 70
           LL+ +S    A A+ V+ E+ +  +Y  D +  G  + +  E  +        ++   W+
Sbjct: 12  LLSVLSYPRPAVAMTVLAEEYAPLSYSVDGQPRGFAVELFHELERRLALPPSDVTFMAWS 71

Query: 71  RAYEKALHEPNVLIFPLDRTPAREQLFKWVGEIHRVASRLYKMRDSKGIAINNLEDAKQY 130
           RAY   L  P   I  + RT  RE    +VG I       YK   S  +A   L++A+  
Sbjct: 72  RAYRLLLRGPRHAILFMGRTMEREDKVWFVGPIWVEDDYFYKKAGSH-VAAATLDEARTV 130

Query: 131 S-IGVVRNDAKQIYLQQRGFTRLVISANNHDNFQKLLNHQIQLLPMPENTARLMSKDAQV 189
           S IGVVR+D  Q+ LQ+ GFT L +  ++    +KL   ++ L+PM E TA   S+ A  
Sbjct: 131 SRIGVVRDDFYQLRLQEMGFTNLDLGTSHEQGLRKLAQGRVDLVPMGELTA--ASQIANY 188

Query: 190 DFTSLEEVYTLDEQPHR--VHLAFSLSTPDEVVARAQRAFEQLKASGEVARIMNE 242
              S++     D    R  +++ FS       V R Q+A + L+  G   +I+ +
Sbjct: 189 PGLSMDSFERTDIHLLRSEMYIGFSRDMAWVEVERWQKALDHLRQDGTYDQILRK 243