Pairwise Alignments

Query, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (307), Expect = 3e-32
 Identities = 128/507 (25%), Positives = 214/507 (42%), Gaps = 42/507 (8%)

Query: 21  FPEQVAIRHLDTEEDTVTYRELHIKAEQCNGALTALGVLPGDKVALVLPNGLAFIAYYLA 80
           FP+  AI  L  +    TYREL  + ++      +LGV PG +V L LPN   +I  Y  
Sbjct: 36  FPDNPAIDFLGRKW---TYRELGEQIDRACAGFQSLGVEPGTRVGLCLPNTPYYIICYYG 92

Query: 81  IIGRGAIPVILNYKLTPFEMASVVSLARPTLVVTTETLWVQHSEVFQADNGVRHSLVLDG 140
           ++  G I V  N      E+  +V  +  TL+VT +   +         +     +V+  
Sbjct: 93  VLKAGGIVVNFNPLYVERELRELVEDSGTTLMVTLDLRQIYPKVAALLGDTALERIVVCS 152

Query: 141 GSEPSSSLPA------NATAISQLPCQ---------------VEPLLLPEGNPVVSVQFT 179
            S    S+ +        + ++ +P                   P+ +     V  +Q+T
Sbjct: 153 MSAILPSVKSLLFSVLKRSELADVPTDRRHIGFAKLIATKTPPRPVAIDPATAVAVLQYT 212

Query: 180 YRGIGRPLAVSHRYLDLTQSSDGLHEHFHLQGVGSVH-LVTLPLYAIFGLSVMMVFPLSV 238
               G P      + ++T +   +   F     G    L  LP + +F ++V M   L++
Sbjct: 213 GGTTGLPKGAMLTHANVTGNLTQILGWFPEARWGEEKMLAVLPFFHVFAMTVAMNVALAL 272

Query: 239 GATLLMTNTLLNRDLAEVLSEHQVTFACLVPDVIRYFNTRLAKRKGALLPLHPQLMIYSG 298
           GA L++        + + ++  + T    VP +       +AK    L  L       SG
Sbjct: 273 GAELILLPRFDLETVLKTIARKKPTLFPGVPTIYSAIIGAVAKTPYDLSSLR---FCLSG 329

Query: 299 GSHLPADEAEKLGKLLGCNPVLQGYGLTESMPVIVQSSI-GTVHRGAMGQPISG--VELR 355
           G+ LP +   +  +L GC  +++GYGL+E+ PV+  + + G +  G++GQP+ G  VE+R
Sbjct: 330 GAPLPIEVKTRFEELTGCT-LIEGYGLSEASPVVCCNPLDGAIKPGSIGQPLPGTTVEIR 388

Query: 356 IVDAQGRDVTPGRIGELLIRGSMVIDGY----NDAEDTNARFFRDGWFHSGDLVWQDDDG 411
            V      V  G  GE+ +RG  V+ GY     D EDT    F DG   +GD+ + DD+G
Sbjct: 389 SVLDPALIVPRGERGEICVRGPQVMAGYWRRPQDTEDT----FIDGALRTGDIGYIDDEG 444

Query: 412 HVFFYCQRLRISKIKAQMVDLVEIESVALKHPDVVRAKAYIVPD--HKEVNVLHLCVEGT 469
           +VF   +   +       V    IE    +H  V  A    +PD    E     + +   
Sbjct: 445 YVFLVDRIKDVILCGGYNVYPRIIEEALYQHEAVAEAVVIGLPDDYRGEAPKAFVRLRDG 504

Query: 470 GELSQNALSTLLSRYLSGFKLPKTIEI 496
              +   L T L+  +S  ++PKTIE+
Sbjct: 505 HSATPEDLKTYLATQISRIEMPKTIEL 531