Pairwise Alignments

Query, 438 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 460 a.a., HlyD family secretion protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  178 bits (451), Expect = 4e-49
 Identities = 121/445 (27%), Positives = 226/445 (50%), Gaps = 27/445 (6%)

Query: 12  DLPTSDHKIRRLGVVIIGVIFGVFGTWAAIAPLDGAAYAPGVVTVQAYRKTVQHLEGGIV 71
           D PTS     RL +  +  +   F  WA  A LD      G V   +  + +Q L+GG++
Sbjct: 23  DAPTS----HRLTIWALTSLIFAFLIWAYFAELDQVTVGTGKVIPSSQIQVIQSLDGGVL 78

Query: 72  KALLAHDGDIVKRDDPLIILDDAQLRFEYEMARGQLIAARAMEARLIAERDSLPMISFGD 131
           + L   +G+IV + +PL  +DD + R ++     ++ +   ++A +I  R  L  I+  D
Sbjct: 79  QELFVREGNIVAKGEPLARIDDTRFRSDFAQQEEEVFS---LQANVIRMRTELNSITVSD 135

Query: 132 IAD---------------PDSVRGMEAR--QGETRVFSARQGSRLGQIAVLRERVGQFRQ 174
           +A                PD++   +A     +   ++ R  +   Q+ +L  ++ Q +Q
Sbjct: 136 MASDWREQVRIVKQELIFPDALSAQKAELVARQQAEYNGRLDNLENQLEILARQIQQRQQ 195

Query: 175 QIKGLESMVGSKVHLEKSYSGEIDELADLLKQGFVDKQRLLEQERKLGLLRSEVADHRST 234
           + + L + + +     +  S E++    L ++G V +  LL+ ER +  L+ E+   R  
Sbjct: 196 ENEELTTKIATMTTSFQLISRELELTRPLAQKGIVPEVELLKLERTVNELQGELKAMRQL 255

Query: 235 IDRTRLQINETQLQILQVDKDFNADVVKQLAEVQTRIYDLKEKTSALEDRLSRIVIRAPE 294
             + +  ++E  L+  +    F AD   QL ++QTR+  + E     +D++S+ VI +P 
Sbjct: 256 RPKIKATLDEAILKRREAVFVFAADTRAQLNDMQTRLSRMSEAQVGAQDKVSKAVITSPV 315

Query: 295 AGMVIDMSVHTIGGIVRPATPLLDIVPSVSDLVIEAQVAPVDIDRIAIGKRADIRFGAFN 354
            G V  + ++T+GG+V+P   +++IVPS   L+IEA++ P DI  + +G  A ++  A++
Sbjct: 316 NGTVKTVHINTLGGVVQPGVDIMEIVPSEDQLLIEAKITPKDIAFLHVGLPAVVKVTAYD 375

Query: 355 SATTPVIEGEVSSVSADRMTNEKTGTAYYLARVRVTEAG-ARTLG-ERKLLPGMPADVLI 412
                 ++G V  +SAD  T ++ G ++YL RVR  E+   +  G E  ++PGM   V +
Sbjct: 376 FTRYGGLQGTVEHISAD-TTQDEEGNSFYLIRVRTAESSLVKDDGTEMPIIPGMLTSVDV 434

Query: 413 ITGQRTLLQYLMQPARNALSQSMIE 437
           ITGQR++L+Y++ P   A   ++ E
Sbjct: 435 ITGQRSILEYILNPILRAKDTALRE 459