Pairwise Alignments

Query, 438 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 466 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  157 bits (398), Expect = 5e-43
 Identities = 116/432 (26%), Positives = 213/432 (49%), Gaps = 14/432 (3%)

Query: 11  ADLPTSDHKIRRLGVVIIGVIFGVFGTWAAIAPLDGAAYAPGVVTVQAYRKTVQHLEGGI 70
           A L    H +  L    +G    VF  WAA A LD        V      + +Q+LEGGI
Sbjct: 43  AALHRKGHPLAFLLSASLGAFLLVFIVWAAFASLDEVTRGQAQVIPSQRIQEIQNLEGGI 102

Query: 71  VKALLAHDGDIVKRDDPLIILDDAQLRFEYEMARGQLIAARAMEARLIAERDSLPMISFG 130
           +  +   +G IV++   L+ LD+      +  A  +     A  ARL  E     M    
Sbjct: 103 ISEIFVREGQIVEKGTVLVRLDNESAASFFRDAVSKSYEHMAAIARLEGE-----MAGKD 157

Query: 131 DIADPDSV-RGMEARQGETRVFSARQGSRLGQIAVLRERVGQFRQQIKGLESMVGSKVHL 189
            +  P+ V +  +    +T + +AR+     +++VL  ++ Q RQ++   + MVG +  L
Sbjct: 158 PVYPPEVVQKAPQVVADQTSIHNARKRQLELELSVLESQLSQKRQEV---DEMVGRQGQL 214

Query: 190 EKSY---SGEIDELADLLKQGFVDKQRLLEQERKLGLLRSEVADHRSTIDRTRLQINETQ 246
             S      + D    L+++    K   L  E+++  LR +++     I + R  ++E +
Sbjct: 215 GASLRVAQEQRDIARPLVEKQIYSKVDYLSLEQRVIQLRGDISSLAVNIPKARSAVHEVE 274

Query: 247 LQILQVDKDFNADVVKQLAEVQTRIYDLKEKTSALEDRLSRIVIRAPEAGMVIDMSVHTI 306
            ++     +  +  V+++ + +  +  L+E  SA EDR++R  +RAP  G V  + ++T 
Sbjct: 275 QRLSHRKAEVRSQAVEEINKRRVELNSLRETLSAGEDRVTRTDLRAPVRGTVKRIIINTQ 334

Query: 307 GGIVRPATPLLDIVPSVSDLVIEAQVAPVDIDRIAIGKRADIRFGAFNSATTPVIEGEVS 366
           GG+V+P   +L++VP    L++EA++ P DI  +  G++A ++  A++ +    +E  + 
Sbjct: 335 GGVVKPGESILELVPLDDTLLVEARIRPADIAFLHPGQKAIVKVTAYDFSIYGGLEAGLE 394

Query: 367 SVSADRMTNEKTGTAYYLARVRVTEAGARTLGER-KLLPGMPADVLIITGQRTLLQYLMQ 425
            +SAD + + K G  YYL ++R  +      GE   ++PGM A V I+TG++T+L YL++
Sbjct: 395 QISADTIEDRK-GEFYYLVKLRTKKNAITYRGENLPIMPGMTATVDILTGKKTVLDYLLK 453

Query: 426 PARNALSQSMIE 437
           P   A   ++ E
Sbjct: 454 PILKAQQNALRE 465