Pairwise Alignments

Query, 438 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 435 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  224 bits (570), Expect = 5e-63
 Identities = 128/418 (30%), Positives = 216/418 (51%), Gaps = 3/418 (0%)

Query: 23  LGVVIIGVIFGVFGTWAAIAPLDGAAYAPGVVTVQAYRKTVQHLEGGIVKALLAHDGDIV 82
           +G + + ++ G FG+W+ +A + GA  APG + V   R+ VQH +GG+V+ +   +GD V
Sbjct: 17  IGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHPDGGVVQRIAVDEGDTV 76

Query: 83  KRDDPLIILDDAQLRFEYEMARGQLIAARAMEARLIAERDSLPMISFGD---IADPDSVR 139
              D LI LD   L+ +  +  GQL    A  A L+AERD    + F +   +    S  
Sbjct: 77  ATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEEVIFDEELLLVSATSPE 136

Query: 140 GMEARQGETRVFSARQGSRLGQIAVLRERVGQFRQQIKGLESMVGSKVHLEKSYSGEIDE 199
             +   G+ R+F AR  S   +   L  R  Q   QI+G+E+   +          E+ +
Sbjct: 137 VADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIEGIEAQQTALTQQLDLIEQELAD 196

Query: 200 LADLLKQGFVDKQRLLEQERKLGLLRSEVADHRSTIDRTRLQINETQLQILQVDKDFNAD 259
              LL +G     R+L  +R+   L   V +  ++      +  E  ++IL++      +
Sbjct: 197 QQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAEFEGRQTEIDIEILKLSTSRREE 256

Query: 260 VVKQLAEVQTRIYDLKEKTSALEDRLSRIVIRAPEAGMVIDMSVHTIGGIVRPATPLLDI 319
            + +L + Q +  +LK++  AL +RLSR+ IRAP  G+V D+SV     ++RPA P+L I
Sbjct: 257 AISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGIVYDLSVFAERSVIRPAEPVLYI 316

Query: 320 VPSVSDLVIEAQVAPVDIDRIAIGKRADIRFGAFNSATTPVIEGEVSSVSADRMTNEKTG 379
           VP    L+I ++V P+++D + +G+  ++RF AF+   TP ++G+V SVS D   +E TG
Sbjct: 317 VPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRLTPELKGKVVSVSPDAFVDEATG 376

Query: 380 TAYYLARVRVTEAGARTLGERKLLPGMPADVLIITGQRTLLQYLMQPARNALSQSMIE 437
            ++Y       E     L    L+PGMP +  I T  RT ++Y ++P  +  +++  E
Sbjct: 377 ASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRAFRE 434