Pairwise Alignments

Query, 301 a.a., Transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 295 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  157 bits (398), Expect = 2e-43
 Identities = 86/287 (29%), Positives = 154/287 (53%), Gaps = 2/287 (0%)

Query: 9   MFHALSQCPSLASAAQRLNVSGPTVMRAIARLEARLGVQLLLRSTRGVVLTEAGIGFMAD 68
           +F  + +C S + A Q+L +S   + + I++LE  LG+QLL R+TR + LT+AG  +   
Sbjct: 9   IFVTVVECGSFSLAGQKLGLSKSAISKRISQLEQHLGIQLLQRTTRSLSLTDAGARYFEY 68

Query: 69  CSRILRAIDEAEASAKGWHVQAQGNLTILLPLLFSRYVMAPVLAGYMDQYPEIRIFAHYH 128
               ++   E   +        +GNL I +P++F R  +AP++A ++ +YP+I++     
Sbjct: 69  IRPAVQLTQEGLDAISELQQTPRGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQMD 128

Query: 129 DRFPNMHEEGLDVAVLVGHLPNCSLIARPVGSVRSLVCASPGYLALHGEPVVPQDLHNHR 188
           D+  ++   G D+A+ +G LP+ SLIAR +    S++CASP YL  HG P+ P +L  H 
Sbjct: 129 DKITDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLTQHGLPMTPCELTQHN 188

Query: 189 LIATQANQDWVQWPFHQPASGLKARTRLNCATLQT-AID-AAAHGAGLMRCLNYPLHDYL 246
            +     QD V+W FH P    + + + N     + AI+ A   G G+     + +   L
Sbjct: 189 CLFYSYFQDGVEWSFHSPDGMQRVQPKGNYQVNNSDAINQACLDGLGIANLPRFIVEPDL 248

Query: 247 NSGRLRRVLQPYEPPSIPVHVVYRERSKAPMRVRSFVDYIVERLREH 293
            +G L+ +L  Y  P   ++ VY +R   P +V   +++++ +L ++
Sbjct: 249 QTGHLQALLTDYPLPEHGIYAVYPQRKYQPTKVTVLIEFLMAKLGQY 295