Pairwise Alignments

Query, 493 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

Subject, 578 a.a., AMP-binding family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 92.4 bits (228), Expect = 4e-23
 Identities = 80/302 (26%), Positives = 131/302 (43%), Gaps = 49/302 (16%)

Query: 137 PAGTAKLTFTSGTTGTPKGVCLSADSLLRVARELEQASQ---------PVEARHHLALLP 187
           P     + FTSGTTG+PKG  LS  ++L     + +A +         PV   H   +  
Sbjct: 218 PYDAINIQFTSGTTGSPKGATLSHHNILNNGYLVAEAMKFTCDDKLCIPVPLYHCFGM-- 275

Query: 188 LAILLENLGCYAALYAGAMLSLPSQKTLGIQGASGVDPTRLLGCLAERRAQSLILVPQLL 247
              +L NL C A    GA    P             DP   L  +   R  +L  VP + 
Sbjct: 276 ---VLGNLVCLA---KGAAAVFP---------GDSFDPLTTLEVVERERCTALHGVPTMF 320

Query: 248 LMLVMAAEQKMFNPHIVRFAAVGGARVSHDLLQRAQRVGL--PVFEGYGLSECA---SVV 302
           +  +   E   F+   +R   + GA    ++++R Q++     V  GYG +EC+    + 
Sbjct: 321 IAELEHPEFTRFDLSSLRTGVMAGATCPEEVMRRVQQLMYMQEVLIGYGQTECSPLNHIT 380

Query: 303 CLNRPQAHRAGSVGQPLPHVEIRLAED----------GEVLIKGSTLLG-YLGEPPHASE 351
            ++ P   R  +VG+ LPH E+++ ++          GEV  +G  ++  Y  +P   + 
Sbjct: 381 EIDSPVEKRVLTVGRALPHTEVKIVDEFGEVLPINQPGEVCSRGYCIMQCYWNDPEKTAA 440

Query: 352 ------WWPSGDLGEFDEDGFLYLRGRKKHQFVTSFGRNVNPEWVEAELTQGGDIAQAFV 405
                 W  SGD+G+ DE G++ + GR K   +   G N+ P  +E +L    D+  A V
Sbjct: 441 TIDREGWLHSGDIGQMDEQGYVQIVGRIKDMIIRG-GENIYPREIEEKLYTHKDVQDAAV 499

Query: 406 YG 407
           +G
Sbjct: 500 FG 501