Pairwise Alignments

Query, 493 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Pseudomonas fluorescens FW300-N2E2

Subject, 554 a.a., AMP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.1 bits (235), Expect = 5e-24
 Identities = 89/373 (23%), Positives = 159/373 (42%), Gaps = 30/373 (8%)

Query: 131 DGPSRLPAGTAKLTFTSGTTGTPKGVCLSADSLLRVARELEQASQPVEARHHLALLPLAI 190
           + P   P     L +TSG+TG PKG   +  S     + + +  +       L+ LPLA 
Sbjct: 158 EAPLPEPDQIMTLIYTSGSTGQPKGAIQTFASYGWTCQAVVRDLRTNGNDRLLSYLPLAH 217

Query: 191 LLENLGCY-AALYAGAMLSLPSQKTLGIQGASGVDPT--------------RLLGCLAER 235
           + E +    ++ Y+G++++        +       PT               ++  +   
Sbjct: 218 ITERVAIEGSSFYSGSVVAFVESLDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVS 277

Query: 236 RAQSLILVPQLLLMLVMAAEQKMFNPHIVRFAAVGGARVSHDLLQRAQRVGLPVFEGYGL 295
           +   L+ +P L+  LV     K    +  R    G A +   L+     +GL + E +G+
Sbjct: 278 KLNLLLKIP-LISSLVKHKIHKGLGLNHCRLLGSGSAPIPPSLIHWYHSIGLNICEAWGM 336

Query: 296 SECASVVCLNRP-QAHRAGSVGQPLPHVEIRLAEDGEVLIKGSTLL-GYLGEPP------ 347
           +E  +   +N P    + G+VG+P+   +IR  EDGE+LIK   L+  Y  +P       
Sbjct: 337 TENCAYSIINYPFDVRKIGTVGKPVQDCQIRQGEDGELLIKSPGLMTAYYLQPEATAAAF 396

Query: 348 HASEWWPSGDLGEFDEDGFLYLRGRKKHQFVTSFGRNVNPEWVEAELTQGGDIAQAFVYG 407
            A  ++ +GDL   D DG + + GR K  F T+ G+ V P  +E +L Q   +    V G
Sbjct: 397 DADGFFHTGDLCAIDADGCVTITGRVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIG 456

Query: 408 EAMPHNHALLWPARA------DCTDQTLELAVAKANDTLPDYARVHRWTRLDQPFSAANG 461
             +PH  AL+  +        +    +L+  +   N  L  +  V     +++P+S  N 
Sbjct: 457 SGLPHPVALVQLSEGANLQAREEVRASLKATLDSVNPHLESHEHVDAIVVVNEPWSIEND 516

Query: 462 MLTANGRPRREAI 474
           +LT   + +R  +
Sbjct: 517 VLTPTLKIKRHVL 529