Pairwise Alignments

Query, 367 a.a., Probable periplasmic spermidine/putrescine-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 367 a.a., polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  327 bits (838), Expect = 3e-94
 Identities = 165/356 (46%), Positives = 238/356 (66%), Gaps = 2/356 (0%)

Query: 13  SLLCAGISTSVAA-VEPGMYLYNWFGLLAPETPKEFEQETGTRVHMDAFDSAEIMQSKVM 71
           +L+ AG   SVA   E  + +YNW   +A +T + F++ETG RV  D FDS E++++K++
Sbjct: 11  ALVTAGTLASVAVQAEEVVRMYNWSDYIAEDTLENFKKETGIRVIYDVFDSNEVVEAKLL 70

Query: 72  AGRTGYDVVVATSNVLPSLIRAGVLQPLDRSQLSNFSHIDPDLLSQLAVNDPGNRYAVPY 131
           +GR+GYD+VV +++ L   I+AG  +PLDRS+L+NF +++ DL+  L   DPGN+YAVPY
Sbjct: 71  SGRSGYDIVVPSNHFLAKQIKAGAFKPLDRSKLTNFKNLNADLMKLLEKADPGNQYAVPY 130

Query: 132 LWGTTGIGYDVDKVRGALGDNAP-VNSWDLIFKEENISKLQSCGVAMLDSPSEIISIALN 190
           LWGT GIGY+++KV+ A+G++AP  NS +LIF  +   K+  CG AMLDS  +++  A+ 
Sbjct: 131 LWGTNGIGYNINKVKAAVGEDAPPFNSMELIFNPKYAEKISKCGFAMLDSADDMVPQAMI 190

Query: 191 YLGLPSNSKNPDDYQKAQALLLKIRPYVLYFDSSKIDADLADGNICAVVGWANGALAAQA 250
           YLGL  NS   +DY+KA  LL KIRPYV YF SS+  +DLA+G+IC   G++     A A
Sbjct: 191 YLGLDPNSTKAEDYEKAGELLEKIRPYVTYFHSSRYISDLANGDICVAYGFSGDVFQAAA 250

Query: 251 INEKANTGRKIAYSLPREGALSWSENLVLLKDAPHPKEGMAFINYMMRPEVIAKTSNHTL 310
             ++A  G KI YS+P+EGA  W + L +  DA + +     INY++RPEVIA  SN+  
Sbjct: 251 RADEAGNGNKIGYSIPKEGANLWFDMLAIPADATNVENAHKLINYLLRPEVIAPISNYVA 310

Query: 311 YPNANKDAAEFVERKLRDNPWIYPDKKTIATLIPLEPLPLKLERIRTRIWTKVKSG 366
           Y N N  A   V+  +R++P IYP K+ +  L   E  PLK++R+ TR+WTKVKSG
Sbjct: 311 YANPNDLAQPLVDEAIRNDPAIYPPKEVLDKLYIGEIRPLKIQRVLTRVWTKVKSG 366