Pairwise Alignments

Query, 355 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 361 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivM from Phaeobacter inhibens DSM 17395

 Score =  182 bits (463), Expect = 9e-51
 Identities = 125/351 (35%), Positives = 184/351 (52%), Gaps = 19/351 (5%)

Query: 8   QFNTRYAQDRRVFALRQDRHGL---AALLLFAFVVVPWLGNDYWFSAILIPFLVLSLAGL 64
           QF T Y  D R+F    DRH L    AL++ A + +P L N+++   +    L+ ++AGL
Sbjct: 4   QFKTSYDHDIRLFP---DRHSLLVYGALVMLA-LALPLLINEFYIGEVT-NVLIWAIAGL 58

Query: 65  GLNLLTGYAGQLSLGSAAFMAVGAFATYNLEVRVAGLPLVVSIALGGLTAALVAVLFGLP 124
           GL LLTG  GQ SLG AAF+A+G +A  N  +   GLP +V+  L G+   +V  +  +P
Sbjct: 59  GLMLLTGQTGQASLGHAAFLAIGCYA--NTILIEQGLPFIVAFPLAGVITGIVGGIIAIP 116

Query: 125 SLRIKGFYLLVSTLAAQFFVTWALTRFSWFSNNSASGVISAPRLDVFGINLDA---PAGR 181
           +LR+ G YL ++T+A        +     ++   +       RL  FGI ++    P   
Sbjct: 117 ALRLHGIYLAIATIALSILADDIIVLLEPWTGGVSGKFPDVIRL--FGIEIERWTMPVRF 174

Query: 182 YLLTLSVVVALFWLGKNLVRSELGRNWMAVRDMDTAAAVIGIALAKTKLLAFAISGFFLG 241
           Y L   V V      +NL+RS LGR + AVRD + +A  +G+ +A+TK  AF +S    G
Sbjct: 175 YYLVFGVTVICTLFYRNLLRSPLGRAFAAVRDSEVSATAMGVHIARTKATAFGLSCMITG 234

Query: 242 VAGALWAFAYLGTVEPHGFDLNRSFQILFIIIIGGLGSLLGNFLGAAFIVLFPVLLSNLV 301
            AGAL  + Y G      F L  S  +L +I+IGGLGS+ G F GA  +   P  LS L 
Sbjct: 235 WAGALMGY-YAGAFNNETFSLVISITLLMMIVIGGLGSIHGAFFGAVVVAFLPQGLSILK 293

Query: 302 SLLPGGLVDAGQVENLQKMIFGALIILFLIKEPEGLARLWQRFRQRARLWP 352
             + G  V    +  L+  +FG ++ILF++ EP GL   W + R    L+P
Sbjct: 294 DSVLGSGV---AIPGLETGVFGMILILFILFEPMGLYGRWLKIRIWFELFP 341