Pairwise Alignments

Query, 437 a.a., Nitrous oxide reductase maturation protein NosD from Pseudomonas fluorescens FW300-N2E2

Subject, 457 a.a., periplasmic copper-binding (RefSeq) from Shewanella loihica PV-4

 Score =  390 bits (1001), Expect = e-113
 Identities = 191/412 (46%), Positives = 266/412 (64%), Gaps = 7/412 (1%)

Query: 17  LVFSLLSGGVLGAPQPITDLPL---QAEGDQQWRLPAGQYRGSFSIDQPMTLTCAPD--A 71
           L FS LS        P  DL     QA+     +L  G+Y G+F I Q + L  A D  +
Sbjct: 35  LSFSPLSQAAYIEVSPEQDLQQVLDQAQMGDNIQLQPGRYLGNFVIKQGIRLIGADDYTS 94

Query: 72  VFQGQGEGNGVIIRAPNVRVQGCTFLDWGHDLTAMNAAVFIQPVAQGAVVRGNRMQGQGF 131
           +   QG+GN +++++  V ++    ++WG DLTA +A ++    A   V+R NR+QG GF
Sbjct: 95  IIDAQGKGNALLLQSSKVTIERLKIVNWGDDLTAQDAGIYSDQSASELVIRENRLQGDGF 154

Query: 132 GIWVDGTRDVSLIDNRIQGDPSLRSQDRGNGIHLYAVHGARVIGNQVRETRDGIYIDTSS 191
           GIW+   +++ +  NRIQG+P LRS DRGNGI L  V    V  N+V +TRDGIYI +S 
Sbjct: 155 GIWLQKGKEIKVHHNRIQGNPGLRSADRGNGIQLSIVQNVEVSDNEVNQTRDGIYIISSQ 214

Query: 192 GNLLQGNVLEDLRYGVHYMFANDNRLLDNVTRRTRTGYALMQSRQLTVIGNRSEQDQNYG 251
            N ++ N + +LRYG+HYM+++ NR+ DN+   TR GYALM SRQLTV GN S   Q+YG
Sbjct: 215 HNTIKNNTMHNLRYGIHYMYSHSNRVQDNLAYDTRAGYALMSSRQLTVSGNESRDSQDYG 274

Query: 252 ILMNYITYSTLRDNFVTDVRDGSTGDTMITGAEGKALFIYNSLFNRIEGNHFERSAVGIH 311
            LMN+ITYS +  N +   R  +  +  + G EGK LF+YNS +N I  N  + + +GIH
Sbjct: 275 FLMNFITYSEISHNRI--YRVWTKPENKVLGREGKGLFVYNSAYNSINHNLIDTAEIGIH 332

Query: 312 LTAGSEDNRIAGNAFVHNQRQVKYVATRLQEWSVDGHGNYWSDYLGWDRNGDGLGDVAYE 371
           LTAGSE  ++ GN+F++N  QVKYVA R  EWS DG GN+WS+YLGWD + DG GD  +E
Sbjct: 333 LTAGSEHTKVFGNSFINNPVQVKYVANRQAEWSQDGRGNFWSNYLGWDLDNDGFGDRPFE 392

Query: 372 PNDNVDRLLWLYPQVRLLMNSPGIELLRWVQRAFPVMKSPGVMDSHPLMETP 423
           PND +D+L+W YP+ ++L++SP + +LRW+Q  FPV+K  GV DS PLM+ P
Sbjct: 393 PNDGIDKLIWQYPEAKMLLDSPAVLILRWIQTQFPVLKPVGVKDSFPLMQAP 444