Pairwise Alignments

Query, 437 a.a., Nitrous oxide reductase maturation protein NosD from Pseudomonas fluorescens FW300-N2E2

Subject, 452 a.a., periplasmic copper-binding (RefSeq) from Shewanella loihica PV-4

 Score =  311 bits (798), Expect = 2e-89
 Identities = 151/379 (39%), Positives = 227/379 (59%), Gaps = 5/379 (1%)

Query: 47  RLPAGQYRGSFSIDQPMTLTCAPDAVFQGQGEGNGVIIRAPNVRVQGCTFLDWGHDLTAM 106
           RL  G+Y G F ++QP+TL   P AV   QG G+ +++ A  V +   T  +WG DL   
Sbjct: 66  RLLPGRYIGRFEVEQPLTLRGEPGAVIDAQGAGSALVVSASGVTLTRLTIRNWGRDLYEK 125

Query: 107 NAAVFIQPVAQGAVVRGNRMQGQGFGIWVDGTRDVSLIDNRIQGDPSLRSQDRGNGIHLY 166
           +AA+ + P A    +  N + G GFGI+     D+ L DN+I+G+      DRG+GIHL 
Sbjct: 126 DAAIRLLPGANEVTIVANELSGPGFGIYASEVSDLKLKDNQIEGEAEAFLLDRGDGIHLL 185

Query: 167 AVHGARVIGNQVRETRDGIYIDTSSGNLLQGNVLEDLRYGVHYMFANDNRLLDNVTRRTR 226
            V+   V GN+++  RDGIY+++  G+ + GN L +L+YG+HYM+   +  +DN+  R  
Sbjct: 186 KVNYPHVSGNRIKTVRDGIYLESGVGSRVYGNHLSELQYGLHYMYTKQDEAMDNLACRVS 245

Query: 227 TGYALMQSRQLTVIGNRSEQDQNYGILMNYITYSTLRDNFV--TDVRDGSTGDTMITGAE 284
            GYALM S  + ++ NR  + + +G+L+N    + ++ N +  T + +   GD     +E
Sbjct: 246 GGYALMNSEGIRLVFNRVREAKEFGVLLNLTHDAEIQANQIEATQMPNSVAGDLF---SE 302

Query: 285 GKALFIYNSLFNRIEGNHFERSAVGIHLTAGSEDNRIAGNAFVHNQRQVKYVATRLQEWS 344
           GK LF+Y +  N+I GN+   + +GI +  G EDN +  N F+ N  QV+YV     EWS
Sbjct: 303 GKGLFVYGAKRNQISGNYIAGNQIGIAMALGGEDNLVYQNQFLANATQVRYVGETRVEWS 362

Query: 345 VDGHGNYWSDYLGWDRNGDGLGDVAYEPNDNVDRLLWLYPQVRLLMNSPGIELLRWVQRA 404
           + G GNYWSDY GWD +GDG+GD  + PND++DRL WLYP+ + LM SP ++LL+W+   
Sbjct: 363 LQGRGNYWSDYRGWDLDGDGIGDGQHLPNDSLDRLFWLYPEAKFLMESPLVKLLKWLDNQ 422

Query: 405 FPVMKSPGVMDSHPLMETP 423
                S GV+DSHP+M  P
Sbjct: 423 LQGEHSVGVVDSHPVMTPP 441