Pairwise Alignments

Query, 437 a.a., Nitrous oxide reductase maturation protein NosD from Pseudomonas fluorescens FW300-N2E2

Subject, 463 a.a., parallel beta-helix repeat (two copies) from Dechlorosoma suillum PS

 Score =  114 bits (285), Expect = 6e-30
 Identities = 108/422 (25%), Positives = 174/422 (41%), Gaps = 66/422 (15%)

Query: 35  DLPLQAEGDQQWRLPAGQYRGSFSIDQPMTLTCAPDAVFQGQGEGNGVIIRAPNVRVQGC 94
           DL  QA      ++PAG Y G   +++P+T+      +  G G+G   ++      ++G 
Sbjct: 80  DLVNQAPEGSVLKVPAGSYSGPVVVNKPLTIEAQGQVIIDGGGKGTVFVLDTSGAVLRGV 139

Query: 95  TFLDWGHDLTAMNAAVFIQPVAQGAVVRGNRMQGQGFGIWVDGTRDVSLIDNRIQGDPSL 154
              + G    + +A + ++      VV   R+    FGI +  + D  L  N I+  P  
Sbjct: 140 HLTNSGGSHDSDDACLNVR--GDRNVVDQVRITNCLFGIDLKQSNDNKLTRNYIRSKP-F 196

Query: 155 RSQDRGNGIHLYAVHGARVIGNQVRETRDGIYIDTSSGNLLQGNVLEDLRYGVHYMFAND 214
               RG+G+ L+      + GN++ ++RD +    S  N+ + NV    RY +H+MFA++
Sbjct: 197 DLGLRGDGVRLWYSKNNLLEGNEIEDSRD-MVAWYSDHNVFRNNVSRRSRYSIHFMFAHE 255

Query: 215 NRLLDNVTRRTRTGYALMQSRQLTVIGNRSEQDQNYGILMNYITYSTLRDNFVTDVRDGS 274
           N                      TV GNR   D   G+ + Y   + +R+N ++      
Sbjct: 256 N----------------------TVEGNRF-YDNAVGVYLMYTKGAYIRNNTISHA---- 288

Query: 275 TGDTMITGAEGKALFIYNSLFNRIEGNHFERSAVGIHLTAG----SEDNRIAGNAFVHNQ 330
                 TGA G A+ +  +    IEGN     + GI              +  N F  N 
Sbjct: 289 ------TGATGMAVGLKEASNTVIEGNEILYCSTGIGTDLSPFEPGSKTEVRKNRFAFNG 342

Query: 331 RQVKYVATR-------------LQEWSVDG---------HGNYWSDYLGWDRNGDGLGDV 368
             V +V+ R             L + +V G         HGNYW  Y G+DRN DG+GD 
Sbjct: 343 IAVSFVSDREGSVFESNVFEGNLADVAVAGGGGAAHNRWHGNYWDGYQGFDRNNDGVGDT 402

Query: 369 AYEPNDNVDRLLWLYPQVRLLMNSPGIELLRWVQRAFPVMKSPGVM--DSHPLMETPVQP 426
            YE     DRL    P      ++P +E L +++R  P    P +M  D  P+ + P + 
Sbjct: 403 PYEDYAYADRLWMEVPFALFFKSAPMMESLDFLERLAP-FSDPVLMVRDEAPVFKNPRRK 461

Query: 427 PP 428
            P
Sbjct: 462 AP 463