Pairwise Alignments

Query, 437 a.a., Nitrous oxide reductase maturation protein NosD from Pseudomonas fluorescens FW300-N2E2

Subject, 445 a.a., periplasmic copper-binding (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  289 bits (739), Expect = 1e-82
 Identities = 166/426 (38%), Positives = 237/426 (55%), Gaps = 22/426 (5%)

Query: 10  VRRLVIALVFSL---LSGG----VLGAPQPITDLPLQAEGDQQWRLPAGQYRGSFSIDQP 62
           VR LV+A++ +L   L+        GAP  +      A       L  G+Y G+  ID P
Sbjct: 2   VRLLVLAVLLTLSLPLAAAERRLAPGAPGDLQTAIAGASPGDVLILAPGRYPGALRIDVP 61

Query: 63  MTLTC-APDAVFQGQGEGNGVIIRAPNVRVQGCTFLDWGHDLTAMNAAVFIQPVAQGAVV 121
           +TLT    +A+  G G+G  V I A +V ++G T    G     ++A + I   A  AV+
Sbjct: 62  VTLTAEGGEAIIDGLGQGTAVEIAAEDVTIRGLTVTGSGMSSKDLDAGIKILRKAHRAVI 121

Query: 122 RGNRMQGQGFGIWVDGTRDVSLIDNRIQGDPSLRSQDRGNGIHLYAVHGARVIGNQVRET 181
             NR+ G   GI + G  D  +  N I G    R  DRGNGI+++   GA V GN VR  
Sbjct: 122 THNRVLGNLHGIDIHGGHDALVAHNEIVGTLQPRLNDRGNGIYVWNSPGAVVEGNSVRYG 181

Query: 182 RDGIYIDTSSGNLLQGNVLEDLRYGVHYMFANDNRLLDNVTRRTRTGYALMQSRQLTVIG 241
           RDGI+ +TS  N+ + N+  DLR+ VHYM  +++ ++ NV+   R GYA+M S ++ V  
Sbjct: 182 RDGIFANTSKKNVFRNNIFRDLRFAVHYMHTHNSEVIGNVSIGNRLGYAIMYSNRVVVRD 241

Query: 242 NRSEQDQNYGILMNYITYSTLRDNFVTDVRDGSTGDTMITGAEGKALFIYNSLFNRIEGN 301
           N S  D+N+G+++N+   + + +N             ++ G   K LFIYN+  N I  N
Sbjct: 242 NLSLGDRNHGVMLNFSNNTDVANN-------------LVRGGSEKCLFIYNAHKNLIYDN 288

Query: 302 HFERSAVGIHLTAGSEDNRIAGNAFVHNQRQVKYVATRLQEWSVDGHGNYWSDYLGWDRN 361
            FE   +GIH TAGSE N + GNAF+ N+ QV+YV T+  EWS +G GNYWSD+  +D N
Sbjct: 289 RFEGCDIGIHFTAGSERNVLTGNAFIGNREQVRYVGTKTVEWSHEGAGNYWSDHPAYDLN 348

Query: 362 GDGLGDVAYEPNDNVDRLLWLYPQVRLLMNSPGIELLRWVQRAFPVMKSPGVMDSHPLME 421
           GDG  D  + PND +D +LW  P   LL+ +P ++L+RW Q +FP     GV+DSHP M 
Sbjct: 349 GDGAADNVFRPNDLMDHILWSQPAAALLLGAPAVQLVRWSQSSFPATLPGGVVDSHPAM- 407

Query: 422 TPVQPP 427
           TPV  P
Sbjct: 408 TPVTIP 413