Pairwise Alignments

Query, 437 a.a., Nitrous oxide reductase maturation protein NosD from Pseudomonas fluorescens FW300-N2E2

Subject, 424 a.a., periplasmic copper-binding (RefSeq) from Shewanella sp. ANA-3

 Score =  284 bits (726), Expect = 4e-81
 Identities = 145/373 (38%), Positives = 212/373 (56%), Gaps = 2/373 (0%)

Query: 48  LPAGQYRGSFSIDQPMTLTCAPDAVFQGQGEGNGVIIRAPNVRVQGCTFLDWGHDLTAMN 107
           L    Y G+FS+ + + L     A      +G+ + I AP V V+G     WG DL   N
Sbjct: 45  LATAVYEGNFSVSRTIHLKGEAGATLDALRQGSALTIAAPKVIVEGLNIRHWGRDLYYQN 104

Query: 108 AAVFIQPVAQGAVVRGNRMQGQGFGIWVDGTRDVSLIDNRIQGDPSLRSQDRGNGIHLYA 167
           A + +QP A   +++GNR+ G GFGI+ +      + +N I G+ ++   DRG+G+ L  
Sbjct: 105 AGILLQPGADEVLIKGNRLVGDGFGIYGEQLSAPRIRENSISGNGAIYVLDRGDGVFLKH 164

Query: 168 VHGARVIGNQVRETRDGIYIDTSSGNLLQGNVLEDLRYGVHYMFANDNRLLDNVTRRTRT 227
           V   +V  N     RDG+Y+++ + + +  N    L+YG+HYM+   +   +N       
Sbjct: 165 VSAPQVQDNHFIFVRDGVYLESVTDSQIHHNQFAKLQYGIHYMYTRGDEASNNQAISVDG 224

Query: 228 GYALMQSRQLTVIGNRSEQDQNYGILMNYITYSTLRDNFVTDVRDGSTGDTMITGAEGKA 287
           GYALM S+ + +  N+  Q +++GIL+N    + ++ N  T+V +     ++  G EGK 
Sbjct: 225 GYALMNSQHIFLHHNKVSQARDFGILLNITNDAHVQANVATEVVNPQ--GSVELGNEGKG 282

Query: 288 LFIYNSLFNRIEGNHFERSAVGIHLTAGSEDNRIAGNAFVHNQRQVKYVATRLQEWSVDG 347
           +FIY +  NRIE N F  S  GI +  G E NR+  N  V NQ QVKYV     EWS  G
Sbjct: 283 IFIYAAQNNRIEANEFSHSDTGISMAMGGEANRLWHNRIVANQTQVKYVGEAQLEWSYQG 342

Query: 348 HGNYWSDYLGWDRNGDGLGDVAYEPNDNVDRLLWLYPQVRLLMNSPGIELLRWVQRAFPV 407
            GNYWS+Y GWD NGDG+GD+ + PND++D+L WLYP+ +LLM SP + LLRWV+R F  
Sbjct: 343 QGNYWSEYQGWDTNGDGVGDIVHRPNDSLDKLFWLYPEAKLLMESPVVLLLRWVERQFQP 402

Query: 408 MKSPGVMDSHPLM 420
             + GV DS PLM
Sbjct: 403 TAASGVSDSFPLM 415