Pairwise Alignments

Query, 395 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 450 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  204 bits (518), Expect = 5e-57
 Identities = 132/334 (39%), Positives = 188/334 (56%), Gaps = 24/334 (7%)

Query: 22  RMLAIDALRGFVMLLMLVDHVRETFLLHRQV---------TDPIDALSVTPDLYFT-RLL 71
           R+ AIDA+RG VMLLM +DHVR  F               TDP++ L VT  L+FT R +
Sbjct: 50  RLRAIDAMRGLVMLLMTLDHVRGHFTYAAYALWHDASPLPTDPLN-LDVTTPLFFTMRWV 108

Query: 72  STLCAPVFIFLTGLSAWLYSQKHTAGQ-TSLFLLKRGLFLVFLELTFVCFAWNAEFPPKT 130
           + LCAP FI L G+S  L+ Q+H  G+  S  L+ RGL L  L +     A  +  P + 
Sbjct: 109 THLCAPSFILLAGVSVHLWQQRHGTGRPVSARLVTRGLMLAGLNMALGLHAPLS--PDRV 166

Query: 131 LWLQVIWCIGICMIVLAALLHLKRRWLILLGVAIVAGHNLLDGVVPGPDSPFFVPWSILH 190
           L L V+W IG+ M++LA  +HL R    ++ + +VAGH+ L G +P  ++  F+ W +  
Sbjct: 167 LILDVLWPIGVSMVLLAVAVHLPRGVAWVMALLLVAGHDALRGFMPDGETASFL-WRLAF 225

Query: 191 QRAFIDITEFTRARTTYPVLPWIGVILLGWAIGPWFGKDVEPAVRLRRLFKMGLGLLLAF 250
            ++++D+ +       YPVLPW GV+ LG+  G     D++   R+R L ++GLGLL A 
Sbjct: 226 VKSYLDVPDVGGLHIIYPVLPWFGVMWLGYLCGGL--ADLDIGRRVRVLPRLGLGLLAAS 283

Query: 251 VLIRYLNVYGDKPWLQTGD-ALRTFMSFMSATKYPPSLMFLMPTLGIGLMLLALFEK--- 306
           VL+R    YGD       D A RT  +F +  KYPPSL FL+ TLG+  +LLA F+    
Sbjct: 284 VLLRLAGGYGDPSTFAVQDTAWRTAAAFFNVAKYPPSLQFLLVTLGVMWLLLAWFDSRCH 343

Query: 307 ---AQDRGAIALLAIYGGAPMFFYLLHLYVLKAL 337
              A  RG    L + G AP+F+Y+ HL VL+ L
Sbjct: 344 LPHATPRGCPGWLVLSGSAPLFYYVAHLVVLRGL 377