Pairwise Alignments

Query, 453 a.a., FIG002188: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 454 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  307 bits (786), Expect = 5e-88
 Identities = 182/462 (39%), Positives = 261/462 (56%), Gaps = 17/462 (3%)

Query: 1   MQNNTLLNTCLLTLALAGVSLAQAAVSPEQVARLKTELTPLGAERAGNADGSIPAWDGGY 60
           M+  TLL+  ++    A  + A+  VS  + A+L TELTPLG E+AGNADGSIPAWDGG 
Sbjct: 1   MKKLTLLSAAVIVALTAPTAFAK--VSEAEAAKLGTELTPLGGEKAGNADGSIPAWDGGI 58

Query: 61  TKVVAGYKPGDKRPDPFASDKPLYSIKASNMEQYAGQLAEGTKLLLKKYPD-YRLDVYPT 119
           TK VAGY+ G   PDPF  DK  ++I  +N  QY   L EG   L   YPD ++++VY T
Sbjct: 59  TKPVAGYEKGMHHPDPFPGDKIEFTITNANKAQYKDNLTEGQLKLFDLYPDTFKMNVYQT 118

Query: 120 HRSAAAPQWVYDNTAKNAGRATLDVETEKVSGAFGGIPFPIPDNGTQVLWNYRLSWQGAE 179
            R+A+ PQ+VYD T  NA RA L  +   +SGA  G+PFPIP NG + +WN+ L ++G +
Sbjct: 119 RRTASVPQFVYDATKANASRAELVADGNGISGASIGVPFPIPQNGLEAIWNHVLRFRGVD 178

Query: 180 TISAPFDTWLMTAGGKKV--QATRALFSYQFPYYSENGSPEQFAGKYQVGKLLTELPSSK 237
             +A        +G   +   A    F Y  P  + +   E     Y   K +   P+  
Sbjct: 179 VETARSQAAPTASGSYTLVETAEEIRFEYSRPEMTLDKLKESNTLFY--FKQVVTQPARL 236

Query: 238 AGEGLMTHWDLDPG--NRAAWQYLVGQRRVRRAPNIAYDTPDFVTSGVGLFDEAFMLFGP 295
           AG  L+    +D     R AW Y  GQRRVR+APN+A+DTP  V+ G+   D+  M  G 
Sbjct: 237 AGTALLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGS 296

Query: 296 TDRYDLKLAGKKELIVPYNNNR--AGLVKSDELVKPNFLNPDLVRWEKHRVWVVEATLKS 353
             RY+ +L GKKE+ +PYN+ +  +  +K ++++KP  +NPD VRWEKHRVWVV+A LK 
Sbjct: 297 PVRYNWELLGKKEIYIPYNDYKLHSDKLKYEQILKPGHINPDYVRWEKHRVWVVKAQLKE 356

Query: 354 GKRHVVPRRTYYIDEDSWQILLVDGYDAQGKLGRQMYSLTLLAPDMPV--LTSQVMWGSY 411
           G RH+   R +Y+DEDSWQ+ + D YD + +L R   +  +   ++P    T +V+   +
Sbjct: 357 GMRHIYKTRVFYLDEDSWQVSMADMYDNRDELYRVAVAHAINYYEVPTHWTTLEVI---H 413

Query: 412 NLDTGAYFLNSSSNDLAVQYQKIATPSASFYTPDAMANENMR 453
           +L +  Y      N+    Y   A  S + +TP A+    +R
Sbjct: 414 DLQSRRYLAMGLDNE-GRMYNFDAKLSEANFTPAALRRAGIR 454