Pairwise Alignments

Query, 453 a.a., FIG002188: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 454 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  301 bits (770), Expect = 4e-86
 Identities = 174/439 (39%), Positives = 247/439 (56%), Gaps = 11/439 (2%)

Query: 22  AQAAVSPEQVARLKTELTPLGAERAGNADGSIPAWDGGYTKVVAGYKPGDKRPDPFASDK 81
           A A +S  + A+L  ELTPLGAE+AGNADGSIPAWDGG TK +AGY  G   PDPF  DK
Sbjct: 20  AMAKISEAEAAKLGNELTPLGAEKAGNADGSIPAWDGGITKPIAGYTKGMHHPDPFPEDK 79

Query: 82  PLYSIKASNMEQYAGQLAEGTKLLLKKYPD-YRLDVYPTHRSAAAPQWVYDNTAKNAGRA 140
             ++I  +N  QY   L  G   L + YP+ Y+++VY T RSA+ PQ+VYD T  NA RA
Sbjct: 80  IEFTITNANKAQYKDYLTPGQMKLFELYPNTYKMNVYKTRRSASVPQFVYDATKVNATRA 139

Query: 141 TLDVETEKVSGAFGGIPFPIPDNGTQVLWNYRLSWQGAETISAPFDTWLMTAGGKKVQAT 200
            L  +   +SGA  GIPFPIP NG + +WN+ L ++G +  ++         G   +  T
Sbjct: 140 ELVAQGNGISGASIGIPFPIPANGLEAIWNHILRFRGMDVETSRSQAAPTADGSYTLVET 199

Query: 201 RALFSYQFPYYSENGSPEQFAGKYQVGKLLTELPSSKAGEGLMTHWDLDPG--NRAAWQY 258
                +++          + +      K +   P+  AG  L+    +D     R AW Y
Sbjct: 200 AEEIRFEYSRPEITLDQLKASNTLFYFKQVVTQPARLAGTALLVKETMDQEALPRQAWTY 259

Query: 259 LVGQRRVRRAPNIAYDTPDFVTSGVGLFDEAFMLFGPTDRYDLKLAGKKELIVPYNNNR- 317
             GQRRVR+APN+A+DTP  V+ G+   D+  M  G   RY+ +L GKKE+ +PYN+ + 
Sbjct: 260 NTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKKEIYIPYNDYKL 319

Query: 318 -AGLVKSDELVKPNFLNPDLVRWEKHRVWVVEATLKSGKRHVVPRRTYYIDEDSWQILLV 376
            +  +K D+++KP  +NP+ VRWEKHRVW V+ATLK G RH+   R  Y+DEDSWQ+ + 
Sbjct: 320 HSDKLKYDQILKPGHINPEFVRWEKHRVWEVKATLKDGMRHIYKTRVMYLDEDSWQVSIA 379

Query: 377 DGYDAQGKLGRQMYSLTLLAPDMPVL--TSQVMWGSYNLDTGAYFLNSSSNDLAVQYQKI 434
           D YD + +L R   +  L   ++P    T +V    ++L +  Y      N   + Y   
Sbjct: 380 DLYDNRDELYRVAVAHGLNYYEVPAQWDTLEVF---HDLQSRRYLAMGLDNQSGM-YNFD 435

Query: 435 ATPSASFYTPDAMANENMR 453
           A  S + +TPDA+  E +R
Sbjct: 436 AKLSEANFTPDALRREGIR 454