Pairwise Alignments

Query, 579 a.a., Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases from Pseudomonas fluorescens FW300-N2E2

Subject, 578 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  205 bits (521), Expect = 5e-57
 Identities = 152/494 (30%), Positives = 232/494 (46%), Gaps = 36/494 (7%)

Query: 95  YARVKYGQAATETLKELVAIPTFRKDGVAQHENPEFLKIADKIKSLAEAFNLNFRNVDNR 154
           YA   YG      L  L+   T   +G+    +PEF+    ++KSL+++  L++ +    
Sbjct: 62  YALNTYGDETISALSTLIPFKTVETEGMTPLTHPEFIGFKAQLKSLSQSLGLDYSD-QGY 120

Query: 155 VYEISLEGGGDEVVGIHAHADVVPVTPENWVLKDGTRLDPFKVTLVGDR--MYGRGTEDD 212
           V  I L G G++ +G+  H DV P     W      + DPF +        + GRGTEDD
Sbjct: 121 VVLIGL-GEGEQKLGVITHGDVQPADASFW------QQDPFTLDSQSQPGFLIGRGTEDD 173

Query: 213 KNGIVVALYAMKIIKEEKLPLARNFKLLVDTTEETTGDAIPYYFERNPTPNYNLALDGGY 272
           K  IV A+YAMK IK++ L L R  +LLV   EE+    +  +       + N+ +D  Y
Sbjct: 174 KGAIVTAMYAMKAIKDKGLALNRRIELLVYLAEESDWAPLKAFLTDFTPADINITIDAEY 233

Query: 273 PVVIAEKGYGTIMANFTR--------------RAAQGKGAEITALTGGLATNQIPSTSVA 318
           PVV AEKG+  I     +              +AA    A +   +GG   +Q+P  +VA
Sbjct: 234 PVVTAEKGWSEIRLTIPKMPKTPKMPKMPKNGKAASSASASLDGFSGGAFDSQVPQQAVA 293

Query: 319 TFASDKPAELATSLLKAGTDYAKRNGGHFEVASQVVGKDVQLTFT--GVSAHSSEPESGV 376
             +      +A    KA      +    FE  S     + QLT T  G S HSS PE+GV
Sbjct: 294 KISGLDKKTIAALKDKASAQQGMKY--QFEQTSSEGQVNGQLTITAEGKSTHSSTPEAGV 351

Query: 377 NPVARMLDFIHGLDGKVALKRNHITDAARYAADNWGLDYLGSKLG-IGFSDAFMGPLTAS 435
           N V  + + + G    +   R+     A++     GL   G + G I + D FMGP+T +
Sbjct: 352 NAVTHLAELLKG----IHFARSESAMTAKFIQQMVGLGLYGEQFGDIAYEDDFMGPMTLA 407

Query: 436 LTYVGMDEKTFKLAVNLRVPVGKTTAALKTEIADKLAAWSKKSHVAV-AFDYSIDEPMYR 494
            T V  +++  ++ +NLR PVGKT   L  E    L  W  +  V++   +    EP   
Sbjct: 408 ATLVKPNDQGTEIVLNLRRPVGKTPEQLDLETHQALEGWQAQHQVSLEGIETYWGEPKLM 467

Query: 495 NPEGEWVKALLAVASENLGMEHKYGTS-AGATSVHDLPNGVQFGLAMPDVKYTGHNDNEF 553
           + +   ++ LL+V             +  G+T+    PN + FG AMP V+YTGH+++EF
Sbjct: 468 D-KAPHLQTLLSVFGHFTDTPSPRPVAIGGSTNSKLFPNALSFGPAMPGVEYTGHSEHEF 526

Query: 554 KTVEQFLLDLQIVT 567
            T  QF+L+LQ+ T
Sbjct: 527 ITKAQFMLNLQMYT 540