Pairwise Alignments

Query, 303 a.a., Cys regulon transcriptional activator CysB from Pseudomonas fluorescens FW300-N2E2

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 83/296 (28%), Positives = 140/296 (47%), Gaps = 14/296 (4%)

Query: 6   LRQLKYFVTTVECGSVAEASRKLYIAQPSIASAIKGLEDSFGVQLLIRHHAQGVSLTPGG 65
           ++ L YF+T VE G+   A+ K +I QP+++  I+ LE++ G QLL R++ Q + LT  G
Sbjct: 5   IKTLHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNN-QKIELTQAG 63

Query: 66  ARFYRKAQELLRMAREFEQNALADNDVVSGQIDIGCFETVAPLYLPRLIAGFRERFPGVE 125
                 A+E+L      +++    + + SG + +G    ++ L +  L+  FR+++PG+E
Sbjct: 64  ILLENSAREILGQWHRLQEDLTNLSGLKSGHLRLGVCPMMSSLIID-LLTAFRQQYPGIE 122

Query: 126 IRVQDGEQQELVQGLTGGRFDL---AIFYEHDLDSTIETEALTAPQRPYALLPVGHRFAD 182
           +++ +       Q L     D+   A+   HD++  +   ALT      A LP  H  A 
Sbjct: 123 LQMYEYGGFGCEQALLNNSLDIAFTALPTTHDIE--LANRALTR-YPLLACLPKDHALAQ 179

Query: 183 QAQVSLRDLALEPMILLDVQPSRTYFVS-IFEELGLTPNIVFSSPSIEMVRGMVGQSFGF 241
           Q  V+ +D    P IL +   S    ++ +  + G+  NI F S   + +  MV    G 
Sbjct: 180 QEAVTWQDFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMGV 239

Query: 242 AVLVTRPHSTC-TYDGQHLVCVDIAEDVTGSALVAGWLKRAHLTKPAQLFVDYCKE 296
           A+L   P   C    G  LV   I  ++T   L   W K   LT  AQ  +D  ++
Sbjct: 240 AIL---PEPICHKLQGSELVFKPIRPNLTWD-LALIWRKDLPLTPAAQALLDLSEQ 291