Pairwise Alignments

Query, 303 a.a., Cys regulon transcriptional activator CysB from Pseudomonas fluorescens FW300-N2E2

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 12/296 (4%)

Query: 6   LRQLKYFVTTVECGSVAEASRKLYIAQPSIASAIKGLEDSFGVQLLIRHHAQGVSLTPGG 65
           ++ L+ F+T VE  +   A++K +I QP+++  I+ LE+S G  LLIR++ Q V LT  G
Sbjct: 5   IKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNN-QKVELTQAG 63

Query: 66  ARFYRKAQELLRMAREFEQNALADNDVVSGQIDIGCFETVAPLYLPRLIAGFRERFPGVE 125
             F   A+E+L      +++    + + SG++ +G    ++ L +  L+  +R+R+PGVE
Sbjct: 64  QLFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSSLII-GLLTSYRKRYPGVE 122

Query: 126 IRVQDGEQQELVQGLTGGRFDLAIFYEHDLDSTIETEALTAPQRPY---ALLPVGHRFAD 182
           +++ +       Q L     D+A      L +T ETE +  P   Y   A LP  H  A 
Sbjct: 123 LQMYEYGGFGCEQALLNNSLDIAF---TALPTTHETELINQPLTKYPLLACLPEAHPLAA 179

Query: 183 QAQVSLRDLALEPMILLDVQPSRTYFVS-IFEELGLTPNIVFSSPSIEMVRGMVGQSFGF 241
           ++ +S +D    P IL +   S    ++ +  + G+  NI F S   + +  MV    G 
Sbjct: 180 KSYLSWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWDFLATMVEADMGL 239

Query: 242 AVLVTRPHSTCTYDGQHLVCVDIAEDVTGSALVAGWLKRAHLTKPAQLFVDYCKEQ 297
           A+L   P   C       +     +      L   W +   LT  A   ++  K++
Sbjct: 240 AIL---PEPICQKLSNSKLVFRPMQPALTWDLALIWRQNLPLTPAANALLELSKQK 292