Pairwise Alignments

Query, 438 a.a., ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE from Pseudomonas fluorescens FW300-N2E2

Subject, 460 a.a., HlyD family type I secretion membrane fusion protein (RefSeq) from Shewanella loihica PV-4

 Score =  158 bits (399), Expect = 4e-43
 Identities = 126/432 (29%), Positives = 208/432 (48%), Gaps = 23/432 (5%)

Query: 24  WALALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGEAVKQ 83
           WALA + A SF  WA  A LD+     G V+ S + + +QS+  G++  + VREG  V +
Sbjct: 33  WALAAL-AFSFLVWAYFAELDRVTTGTGKVIPSSQVQVIQSLDGGIMKELYVREGMTVTK 91

Query: 84  GQPLFRLDQTQAAAD-------VQSLQAQYRMTWASL---------ARWQSERDNLLQ-V 126
           GQPL R+D T+  +D       V SLQA      A L         A W+ +     Q +
Sbjct: 92  GQPLVRIDDTRFRSDFAQQEQEVYSLQANVIRLRAELNSITISDVAADWREQVKIAKQPL 151

Query: 127 SFPAELSRDPDPRLALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRARSDL 186
            FP EL+         ++E QR  +S R +  + +   L   I+    +   +    + L
Sbjct: 152 QFPPELTESEHD----LIERQRDEYSGRLDNLSNQLEILARQIQQKQQETEELASKINTL 207

Query: 187 TAQAESLRLQLGNLQPLADNGYIPRNRLLDYQRQLSQVQQELAQNSGESGRVEQGIVESR 246
           T   + +  +L   +PLAD G +P   LL  +R ++ ++ EL+       +++    E+ 
Sbjct: 208 TTSFQLVTRELELTRPLADKGIVPEVELLKLERNVNDIRGELSSLRLLRPKLKASQDEAI 267

Query: 247 LKLQQHNEEYQKEVRSQLADAQLKSETLQEQLKSAGFELQHSEILATADGIAVNLGVHTE 306
           LK ++    Y  E R+QL + Q +   + E    A  ++  +EI++  +G    + ++T 
Sbjct: 268 LKRREAVFVYAAEARTQLNEMQTRLSRINEAQVGARDKVSKAEIVSPVNGTIKTVHINTL 327

Query: 307 GAVVRQGDTLLEIVPQGTRLEVEGHLPVHLIDKVGAHLPVDILFTAFNQNRTPRVPGEVS 366
           G VV+ G  ++EIVP   +L +E  +    I  +   LP  +  TA++  R   + G V 
Sbjct: 328 GGVVQPGIDIIEIVPSEDQLLIETKIIPKDIAFLHPGLPAVVKVTAYDFTRYGGLNGVVE 387

Query: 367 LISADQMLDEKTGAPYYV-LRSSVSDVAMDKLNGLVIKPGMPAEMFVRTGERSLLNYLFK 425
            ISAD   DE+  + Y V +R+ +S +  D    + I PGM   + V TG+RS+L Y+  
Sbjct: 388 HISADTTQDEEGNSFYLVRVRTELSSLTKDDGTLMPIIPGMLTTVDVITGQRSVLEYILN 447

Query: 426 PLLDRAGSALTE 437
           P+L    +AL E
Sbjct: 448 PILRARDTALRE 459