Pairwise Alignments

Query, 438 a.a., ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE from Pseudomonas fluorescens FW300-N2E2

Subject, 484 a.a., HlyD family secretion protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  147 bits (372), Expect = 5e-40
 Identities = 113/428 (26%), Positives = 204/428 (47%), Gaps = 15/428 (3%)

Query: 24  WALALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGEAVKQ 83
           WALA + A  F  WA  A LD      G V+ S + + +QS+  G++  + VR+G+ V +
Sbjct: 57  WALAAMVA-CFLLWAGFAELDTVTTGSGKVIPSSQVQVIQSLDGGIMQELFVRDGDLVTK 115

Query: 84  GQPLFRLDQTQAAADVQSLQAQYRMTWASLARWQSERDNLL----------QVSFPAELS 133
           GQPL R+D T+  +D    + +      +  R ++E D++L          QV    +  
Sbjct: 116 GQPLVRIDDTRFRSDFAQQEQEVFGLKTNAIRMRAELDSILISDMTSDWREQVKITKKDL 175

Query: 134 RDPDPRL---ALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRARSDLTAQA 190
             PD  +     +++ Q++ +S R +  + +   L   I+    ++  +    + LT   
Sbjct: 176 VFPDSIIQAEPALVKRQQEEYSGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLTTSM 235

Query: 191 ESLRLQLGNLQPLADNGYIPRNRLLDYQRQLSQVQQELAQNSGESGRVEQGIVESRLKLQ 250
           + +  +L   +PLA  G +P   LL  +R ++  Q EL        +++  + E+ LK +
Sbjct: 236 QLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNSLRLLRPKLKAALDEAILKRR 295

Query: 251 QHNEEYQKEVRSQLADAQLKSETLQEQLKSAGFELQHSEILATADGIAVNLGVHTEGAVV 310
           +    Y  ++R+QL + Q +   + E    A  ++  + I +  +G    + ++T G VV
Sbjct: 296 EAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAIITSPVNGTIKTVHINTLGGVV 355

Query: 311 RQGDTLLEIVPQGTRLEVEGHLPVHLIDKVGAHLPVDILFTAFNQNRTPRVPGEVSLISA 370
           + G  ++EIVP   +L +E  +    I  +   LP  +  TA++  R   + G V  ISA
Sbjct: 356 QPGVDIIEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKVTAYDFTRYGGLKGTVEHISA 415

Query: 371 DQMLDEKTGAPYYV-LRSSVSDVAMDKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLD 429
           D   DE+  + Y + +R+  S +  D    + I PGM   + V TG+RS+L Y+  P+L 
Sbjct: 416 DTSQDEEGNSFYLIKVRTEESSLIKDDGTQMPIIPGMLTTVDVITGQRSILEYILNPILR 475

Query: 430 RAGSALTE 437
              +AL E
Sbjct: 476 AKDTALRE 483