Pairwise Alignments

Query, 770 a.a., DinG family ATP-dependent helicase CPE1197 from Pseudomonas fluorescens FW300-N2E2

Subject, 712 a.a., ATP-dependent DNA helicase from Ralstonia solanacearum IBSBF1503

 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 77/247 (31%), Positives = 108/247 (43%), Gaps = 38/247 (15%)

Query: 514 FLRPRLTAARSTVLFSATLSPRH---YYADLLGTPGDTVWIDVESPFKAEQLDVQVVSR- 569
           F R R    R+ +  SATLS R    +YA  LG   D   + ++SPF      +  V R 
Sbjct: 438 FSRQRAGQPRAWIFTSATLSVRGNFTHYAAQLGLDRDRS-MTLDSPFDYASQGLLYVPRN 496

Query: 570 ----ISTRF--AHRQASLEPIAALMARQF----NERPGNYLAFFSSFDYLQQVAGLFAER 619
                  RF  A   A+L  I A   + F      R  N  A        +++A  FA+R
Sbjct: 497 LPQPSDPRFTDAVLDAALPMIEAAGGKTFVLCTTLRAVNRAA--------ERLADEFAQR 548

Query: 620 YPQIALWTQSRGMGEAPRQAFLERFMEHSQGIGFAVLGGA--FGEGIDLPGSRLIGAFIA 677
                L  Q    G+A R   L+RF    + +G AVL G+  F EG+D+ G  L    I 
Sbjct: 549 GWAFPLLVQ----GQASRTELLDRF----RALGNAVLIGSQSFWEGVDVRGEALSLVVID 600

Query: 678 TLGLAQFNPVNEQMKQRMAAIFGDGYDYTYLYPGLQKVV---QAAGRVIRTQQDRGVVML 734
            L  A   P +  +  RM A+   G     ++     V+   Q AGR+IR++ DRGV+M+
Sbjct: 601 KLPFAP--PDDPVLSARMEALEKKGLSPFAVHQLPHAVITLKQGAGRLIRSESDRGVLMI 658

Query: 735 IDDRFGE 741
            D R  E
Sbjct: 659 CDPRLVE 665



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 35/279 (12%)

Query: 179 TLAFPHASFRP--GQRHLAESVFKAVSTGRCLMAQAPTGIGKTVGTLFP--------MLK 228
           TLA    S+RP   Q  +A++V   + +   L+ +A TG GKT   L P        +L 
Sbjct: 44  TLAQGIESYRPRASQLTMAQAVANTIESADSLIVEAGTGTGKTYAYLAPAMLWGGKVILS 103

Query: 229 ALAPQRLDKVFFLTAKTPGRKLALDAAQVITRSAPSMPLRV-LEMIARD-KACEHPDKAC 286
                  D++F     T  + L    A  + +   +      LE  +++ +     D A 
Sbjct: 104 TGTKNLQDQLFLRDIPTVRKALNAPVAVALLKGRANYLCHYHLERTSQNGRLSSRQDAAW 163

Query: 287 HGESCPLARGFYDRLPGARAAASQVTLLDQAAL-------REIALAHEVCPYYL------ 333
             E   + R       G +A  S  T+ + A +       R+  L  + C YY       
Sbjct: 164 LRE---INRFLKTTKTGDKAELS--TVPENAPVWNLVTSTRDNCLGSD-CAYYKDCFVMR 217

Query: 334 SQEMARWADVVVADYNYYF-DFSALLFGLAQANGWTVATLVDEAHNLVERGRQMYSATLD 392
           +++ A+ ADVVV +++ +F D      G+A+        + DEAH L E     +  T+ 
Sbjct: 218 ARKEAQQADVVVVNHHLFFADVMLKDTGMAELLPAANTVIFDEAHQLPETATLFFGDTVS 277

Query: 393 QATLTSV-RKTAPEPLKKSLDRVNRQWNALHAPQVAAYR 430
            + L  + R +  E L  + D V+  W A+  P   A R
Sbjct: 278 TSQLLELARDSVAEGLSHARDAVD--WVAIAVPLERAAR 314