Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 1e-52
 Identities = 96/293 (32%), Positives = 173/293 (59%), Gaps = 17/293 (5%)

Query: 6   GIDFFVRAAETRSFSEAGRALGISSSAVGKSVARLEERLGVRLFHRSTRSITLTAEGTLF 65
           GI  FV  AE  +F+ A + L +S++ V + +  LE RLG +LF+R+TR ++LT EGT++
Sbjct: 6   GISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIY 65

Query: 66  LERCRRILCEVEAAELELSQTRQAPRGKLRVSLPLV--ADLVMPTLMAFMRRYPSIELDL 123
              CR++   +E AE  ++  + +P+G ++++ P+      +MP L  FM +YPS+E ++
Sbjct: 66  YRHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNV 125

Query: 124 DFSDRLVDIIEEGFDVVVRTGEPNDSRLMSRPLGTFKLVVVGSPRYLAEHGTPQVPADLL 183
           D ++R +D+IE G+D+ +R G+  DS LM++PL +    V  SP Y+ ++G P   ++L 
Sbjct: 126 DLTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELN 185

Query: 184 RHACLL-----YKFPSTGRMQVWPINGEGQPDLNLPATLVCNTTEALLYVVRDALGIACV 238
           +H CL+     ++F   GR + + + G+          L+CN+  AL       +GI  +
Sbjct: 186 QHNCLIGNHNYWRFIEHGRERNFKVRGK----------LICNSGYALRDAALKGIGIVQL 235

Query: 239 PDFTVRDAIAAGELVTVLDDFNRHQSTFRMLWPSSKHLAPKLRVFIDFMSSEL 291
           PD+ + + I AG L++ LD     +     L+P ++HL+ K+RV +D+++ +L
Sbjct: 236 PDYYIEEDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEKL 288