Pairwise Alignments

Query, 323 a.a., dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) from Pseudomonas fluorescens FW300-N2E2

Subject, 340 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  152 bits (384), Expect = 1e-41
 Identities = 105/329 (31%), Positives = 164/329 (49%), Gaps = 17/329 (5%)

Query: 4   LVTGVAGFIGFHTAKRLCSDGHQVIGIDNLNSYYSVELKQAR-LAQLAEYRDFRFQLLDV 62
           L+TGVAGFIG +  ++L      VIG+DN  +     L + + L    ++  F F   D+
Sbjct: 19  LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78

Query: 63  ADKQALLELFAEQAFDQVVHLAAQAGVRYSIDNPDVYAQSNLVGFLNVLEACRAHRPAHL 122
            D  A+ E       D V+H AA   V  SI +P     +N+ GFLN+L+A +       
Sbjct: 79  RD-YAICEAVVN-GVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSF 136

Query: 123 IFASSSSVYGLNDRLPYATTDPVDQPVSFYAATKRANELMAHAYSHLYGIPTTGLRFFTV 182
            +A+SSS YG +  LP    + +  P+S YA TK  NEL A  Y+  YG  T GLR+F V
Sbjct: 137 TYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRYFNV 195

Query: 183 YG----PWGRPDMAPFKFTDAILNGRAIDVYNDGAMSRDFTYIDDIVEGLVRLIPLPPTD 238
           +G    P G       K+T +++ G  + +  DG  SRDF YID++V+  +    L  T 
Sbjct: 196 FGRRQDPNGAYAAVIPKWTSSMIKGEDVFINGDGETSRDFCYIDNVVQMNI----LAATA 251

Query: 239 ETGVRNKVYNIGFGSPVKLLQFIECIEEALGIRAIK-----NFLPLQSGDVVDTWADTRE 293
            +  +N+VYN+  G    L      I+++L    I      N+   ++GDV  + AD  +
Sbjct: 252 ASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGDVRHSQADVSK 311

Query: 294 LEERVGFRPQVAVPVGVRSFVDWYRDYYA 322
              R+G++    +  G+   + WY+++ A
Sbjct: 312 AVTRLGYQYTHKILEGISEAMPWYKEFLA 340