Pairwise Alignments

Query, 508 a.a., cell wall degradation protein from Pseudomonas fluorescens FW300-N2E2

Subject, 458 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (434), Expect = 4e-47
 Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 12/320 (3%)

Query: 191 LQPDKQDARVPALAQRLFNEGYLSTPPQ--LSDEHYSPMLVEAMKSFQAQHSLQADGVVG 248
           L+P      +P +  RL     L   PQ   S  ++   L  AM  FQ +H L+ D ++G
Sbjct: 135 LKPGDSHRIIPEIRVRL---QALGDYPQGDTSGLYFDETLKAAMIKFQTRHGLKPDAIIG 191

Query: 249 PWTVTELNISPAMRREQLRINLERMRWLAQDVEADSVLVNVAAAQLTVYQGGAPVWQTRT 308
           P T++ LN +P  R + L +N  R      D+    +L+N+ A ++ +        +++ 
Sbjct: 192 PATLSWLNRTPRERAQLLAVNFIRRAEYLADIGERYLLINIPAYEMWLVDDNQVALRSKV 251

Query: 309 QVGRAQRQTPLLKSHVTRLTLNPTWTIPPTIMREDKLPEIRRDPEFLSRHNLRILDGDGL 368
            VG+  RQTP++   +  L LNP+W +P  ++  D LP++R D  ++S  N  + D  G 
Sbjct: 252 IVGKPYRQTPIISGEIKNLVLNPSWRVPRRLLTHDLLPKVREDGSYISSRNFEVFDYQGE 311

Query: 369 PLLAEDIDWEHPGN----LMLRQDPGPKNPLGKMAIRFPNPFSVYLHDTPSQALFSKGPR 424
            ++  D +W           L Q PG  N LG+    FPN +SVYLHDT  +ALF +  R
Sbjct: 312 RVIKSDDEWRDIAKGKFPYRLVQKPGVGNTLGRYKFFFPNEYSVYLHDTSDKALFQRSDR 371

Query: 425 AFSSGCVRIEQVMRLRDLLVSPAERAR---TETLLASESTHEFRLARPVPILLGYWTAQA 481
           A SSGC+RIE+V +L + + S   R +       +  + T  F     +PI L YWT+  
Sbjct: 372 ALSSGCIRIEKVEQLANWMASHLVRDKQTWVRMQIERDKTQWFAFDAGLPIHLVYWTSWL 431

Query: 482 DSQGQAVYVPDIYGRDATLS 501
           D    A +  DIY ++  +S
Sbjct: 432 DDDNVAQFRDDIYKKNQNIS 451